CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0954
GLY 410.0176
VAL 420.0164
PRO 430.0151
GLY 440.0123
GLN 450.0119
VAL 460.0120
ASP 470.0112
PHE 480.0115
TYR 490.0095
ALA 500.0097
ARG 510.0111
PHE 520.0105
SER 530.0076
PRO 540.0070
SER 550.0099
PRO 560.0112
LEU 570.0115
SER 580.0098
MET 590.0092
LYS 600.0097
GLN 610.0096
PHE 620.0063
LEU 630.0142
ASP 640.0248
PHE 650.0110
GLY 660.0255
SER 670.0954
CYS 710.0077
GLU 720.0086
LYS 730.0139
THR 740.0118
SER 750.0121
PHE 760.0102
MET 770.0102
PHE 780.0116
LEU 790.0109
ARG 800.0075
GLN 810.0091
GLU 820.0094
LEU 830.0091
PRO 840.0074
VAL 850.0065
ARG 860.0068
LEU 870.0072
ALA 880.0076
ASN 890.0070
ILE 900.0052
MET 910.0079
LYS 920.0079
GLU 930.0076
ILE 940.0073
SER 950.0093
LEU 960.0082
LEU 970.0073
PRO 980.0065
ASP 990.0129
ASN 1000.0083
LEU 1010.0076
LEU 1020.0085
ARG 1030.0097
THR 1040.0113
PRO 1050.0137
SER 1060.0149
VAL 1070.0125
GLN 1080.0145
LEU 1090.0143
VAL 1100.0121
GLN 1110.0131
SER 1120.0143
TRP 1130.0120
TYR 1140.0104
ILE 1150.0120
GLN 1160.0117
SER 1170.0089
LEU 1180.0092
GLN 1190.0097
GLU 1200.0081
LEU 1210.0067
LEU 1220.0055
ASP 1230.0053
PHE 1240.0021
LYS 1250.0031
ASP 1260.0092
LYS 1270.0093
SER 1280.0134
ALA 1290.0125
GLU 1300.0204
ASP 1310.0105
ALA 1320.0114
LYS 1330.0102
ALA 1340.0054
ILE 1350.0092
TYR 1360.0121
ASP 1370.0089
PHE 1380.0077
THR 1390.0073
ASP 1400.0074
THR 1410.0059
VAL 1420.0052
ILE 1430.0069
ARG 1440.0061
ILE 1450.0037
ARG 1460.0055
ASN 1470.0109
ARG 1480.0100
HIS 1490.0104
ASN 1500.0114
ASP 1510.0118
VAL 1520.0098
ILE 1530.0091
PRO 1540.0092
THR 1550.0121
MET 1560.0116
ALA 1570.0128
GLN 1580.0163
GLY 1590.0153
VAL 1600.0127
ILE 1610.0180
GLU 1620.0185
TYR 1630.0154
LYS 1640.0168
GLU 1650.0313
SER 1660.0344
PHE 1670.0277
ASP 1700.0192
PRO 1710.0183
VAL 1720.0096
THR 1730.0024
SER 1740.0011
GLN 1750.0074
ASN 1760.0073
VAL 1770.0078
GLN 1780.0090
TYR 1790.0085
PHE 1800.0077
LEU 1810.0082
ASP 1820.0078
ARG 1830.0067
PHE 1840.0061
TYR 1850.0061
MET 1860.0053
SER 1870.0045
ARG 1880.0052
ILE 1890.0079
SER 1900.0087
ILE 1910.0079
ARG 1920.0105
MET 1930.0126
LEU 1940.0087
LEU 1950.0089
ASN 1960.0135
GLN 1970.0116
HIS 1980.0081
SER 1990.0090
LEU 2000.0128
LEU 2010.0107
PHE 2020.0036
GLY 2030.0039
HIS 2150.0415
ILE 2160.0302
GLY 2170.0253
SER 2180.0276
ILE 2190.0237
ASN 2200.0244
PRO 2210.0257
ASN 2220.0211
CYS 2230.0207
ASN 2240.0173
VAL 2250.0146
LEU 2260.0148
GLU 2270.0196
VAL 2280.0126
ILE 2290.0079
LYS 2300.0156
ASP 2310.0119
GLY 2320.0062
TYR 2330.0140
GLU 2340.0128
ASN 2350.0085
ALA 2360.0132
ARG 2370.0138
ARG 2380.0077
LEU 2390.0111
CYS 2400.0140
ASP 2410.0077
LEU 2420.0121
TYR 2430.0157
TYR 2440.0136
ILE 2450.0129
ASN 2460.0095
SER 2470.0160
PRO 2480.0219
GLU 2490.0211
LEU 2500.0215
GLU 2510.0253
LEU 2520.0177
GLU 2530.0111
GLU 2540.0120
LEU 2550.0203
ASN 2560.0137
ALA 2570.0169
LYS 2580.0123
SER 2590.0343
PRO 2600.0432
GLY 2610.0501
GLN 2620.0263
PRO 2630.0164
ILE 2640.0157
GLN 2650.0169
VAL 2660.0173
VAL 2670.0163
TYR 2680.0176
VAL 2690.0217
PRO 2700.0216
SER 2710.0180
HIS 2720.0157
LEU 2730.0115
TYR 2740.0081
HIS 2750.0071
HIS 2750.0072
MET 2760.0059
VAL 2770.0056
PHE 2780.0071
GLU 2790.0074
LEU 2800.0116
PHE 2810.0177
LYS 2820.0163
ASN 2830.0221
ALA 2840.0235
MET 2850.0224
ARG 2860.0229
ALA 2870.0281
THR 2880.0222
MET 2890.0146
GLU 2900.0226
HIS 2910.0178
HIS 2920.0058
ALA 2930.0281
ASN 2940.0619
ARG 2950.0459
GLY 2960.0461
VAL 2970.0316
TYR 2980.0223
PRO 2990.0240
PRO 3000.0256
ILE 3010.0242
GLN 3020.0234
VAL 3030.0133
HIS 3040.0076
VAL 3050.0095
THR 3060.0111
LEU 3070.0096
GLY 3080.0066
ASN 3090.0139
GLU 3100.0122
ASP 3110.0099
LEU 3120.0111
THR 3130.0071
VAL 3140.0035
LYS 3150.0055
MET 3160.0132
SER 3170.0229
ASP 3180.0247
ARG 3190.0219
GLY 3200.0228
GLY 3210.0161
GLY 3220.0232
VAL 3230.0379
PRO 3240.0392
LEU 3250.0200
ARG 3260.0319
LYS 3270.0257
ILE 3280.0168
ASP 3290.0116
ARG 3300.0128
LEU 3310.0114
PHE 3320.0082
ASN 3330.0082
TYR 3340.0086
MET 3350.0076
TYR 3360.0074
SER 3370.0095
THR 3380.0121
ALA 3390.0137
PRO 3400.0163
ARG 3410.0132
PRO 3420.0273
ARG 3430.0619
VAL 3440.0432
GLU 3450.0166
THR 3460.0354
SER 3470.0608
ARG 3480.0452
ALA 3490.0307
VAL 3500.0285
PRO 3510.0230
LEU 3520.0218
ALA 3530.0210
GLY 3540.0105
PHE 3550.0055
GLY 3560.0055
TYR 3570.0066
GLY 3580.0046
LEU 3590.0029
PRO 3600.0054
ILE 3610.0060
SER 3620.0062
ARG 3630.0058
LEU 3640.0075
TYR 3650.0126
ALA 3660.0125
GLN 3670.0122
TYR 3680.0127
PHE 3690.0143
GLN 3700.0139
GLY 3710.0160
ASP 3720.0106
LEU 3730.0057
LYS 3740.0082
LEU 3750.0133
TYR 3760.0186
TYR 3760.0184
SER 3770.0256
LEU 3780.0304
GLU 3790.0484
GLY 3800.0298
TYR 3810.0075
GLY 3820.0097
THR 3830.0156
ASP 3840.0134
ALA 3850.0111
VAL 3860.0043
ILE 3870.0064
TYR 3880.0106
ILE 3890.0146
LYS 3900.0118
ALA 3910.0096
LEU 3920.0080
SER 3930.0082
THR 3940.0110
ASP 3950.0117
SER 3960.0118
ILE 3970.0115
GLU 3980.0124
ARG 3990.0112
LEU 4000.0068
PRO 4010.0043
VAL 4020.0049
TYR 4030.0091
ASN 4040.0102
LYS 4050.0158
ALA 4060.0154
ALA 4070.0105
TRP 4080.0089
LYS 4090.0091
HIS 4100.0094
TYR 4110.0084
ASN 4120.0094
THR 4130.0087
ASN 4140.0064
ALA 4170.0048
ASP 4180.0036
ASP 4190.0029
TRP 4200.0030
CYS 4210.0018
VAL 4220.0035
PRO 4230.0019

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.