CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0608
GLY 410.0608
VAL 420.0448
PRO 430.0408
GLY 440.0212
GLN 450.0114
VAL 460.0162
ASP 470.0199
PHE 480.0133
TYR 490.0084
ALA 500.0113
ARG 510.0170
PHE 520.0098
SER 530.0060
PRO 540.0068
SER 550.0086
PRO 560.0153
LEU 570.0191
SER 580.0242
MET 590.0249
LYS 600.0268
GLN 610.0233
PHE 620.0186
LEU 630.0244
ASP 640.0300
PHE 650.0140
GLY 660.0180
SER 670.0520
CYS 710.0091
GLU 720.0109
LYS 730.0156
THR 740.0166
SER 750.0109
PHE 760.0122
MET 770.0121
PHE 780.0091
LEU 790.0084
ARG 800.0085
GLN 810.0054
GLU 820.0034
LEU 830.0040
PRO 840.0041
VAL 850.0026
ARG 860.0036
LEU 870.0038
ALA 880.0060
ASN 890.0084
ILE 900.0089
MET 910.0079
LYS 920.0077
GLU 930.0142
ILE 940.0117
SER 950.0147
LEU 960.0183
LEU 970.0193
PRO 980.0211
ASP 990.0383
ASN 1000.0177
LEU 1010.0105
LEU 1020.0149
ARG 1030.0279
THR 1040.0183
PRO 1050.0231
SER 1060.0174
VAL 1070.0115
GLN 1080.0234
LEU 1090.0215
VAL 1100.0130
GLN 1110.0133
SER 1120.0171
TRP 1130.0147
TYR 1140.0074
ILE 1150.0134
GLN 1160.0138
SER 1170.0114
LEU 1180.0084
GLN 1190.0103
GLU 1200.0090
LEU 1210.0076
LEU 1220.0055
ASP 1230.0055
PHE 1240.0063
LYS 1250.0071
ASP 1260.0060
LYS 1270.0051
SER 1280.0107
ALA 1290.0187
GLU 1300.0264
ASP 1310.0262
ALA 1320.0336
LYS 1330.0303
ALA 1340.0134
ILE 1350.0175
TYR 1360.0222
ASP 1370.0127
PHE 1380.0137
THR 1390.0201
ASP 1400.0196
THR 1410.0158
VAL 1420.0166
ILE 1430.0189
ARG 1440.0192
ILE 1450.0178
ARG 1460.0163
ASN 1470.0187
ARG 1480.0182
HIS 1490.0148
ASN 1500.0136
ASP 1510.0116
VAL 1520.0082
ILE 1530.0017
PRO 1540.0045
THR 1550.0089
MET 1560.0039
ALA 1570.0027
GLN 1580.0116
GLY 1590.0070
VAL 1600.0073
ILE 1610.0170
GLU 1620.0189
TYR 1630.0150
LYS 1640.0282
GLU 1650.0584
SER 1660.0593
PHE 1670.0432
ASP 1700.0247
PRO 1710.0262
VAL 1720.0122
THR 1730.0094
SER 1740.0092
GLN 1750.0099
ASN 1760.0139
VAL 1770.0140
GLN 1780.0106
TYR 1790.0124
PHE 1800.0139
LEU 1810.0130
ASP 1820.0114
ARG 1830.0136
PHE 1840.0098
TYR 1850.0088
MET 1860.0109
SER 1870.0087
ARG 1880.0078
ILE 1890.0071
SER 1900.0098
ILE 1910.0077
ARG 1920.0087
MET 1930.0071
LEU 1940.0049
LEU 1950.0070
ASN 1960.0059
GLN 1970.0025
HIS 1980.0077
SER 1990.0113
LEU 2000.0071
LEU 2010.0106
PHE 2020.0134
GLY 2030.0167
HIS 2150.0220
ILE 2160.0194
GLY 2170.0152
SER 2180.0169
ILE 2190.0216
ASN 2200.0240
PRO 2210.0230
ASN 2220.0239
CYS 2230.0198
ASN 2240.0165
VAL 2250.0139
LEU 2260.0132
GLU 2270.0154
VAL 2280.0144
ILE 2290.0099
LYS 2300.0113
ASP 2310.0128
GLY 2320.0126
TYR 2330.0099
GLU 2340.0131
ASN 2350.0142
ALA 2360.0130
ARG 2370.0109
ARG 2380.0133
LEU 2390.0123
CYS 2400.0105
ASP 2410.0104
LEU 2420.0145
TYR 2430.0134
TYR 2440.0091
ILE 2450.0109
ASN 2460.0042
SER 2470.0019
PRO 2480.0022
GLU 2490.0035
LEU 2500.0040
GLU 2510.0072
LEU 2520.0096
GLU 2530.0159
GLU 2540.0163
LEU 2550.0189
ASN 2560.0184
ALA 2570.0192
LYS 2580.0132
SER 2590.0275
PRO 2600.0360
GLY 2610.0351
GLN 2620.0366
PRO 2630.0265
ILE 2640.0162
GLN 2650.0132
VAL 2660.0151
VAL 2670.0180
TYR 2680.0182
VAL 2690.0188
PRO 2700.0189
SER 2710.0168
HIS 2720.0145
LEU 2730.0135
TYR 2740.0143
HIS 2750.0129
HIS 2750.0129
MET 2760.0107
VAL 2770.0100
PHE 2780.0121
GLU 2790.0110
LEU 2800.0080
PHE 2810.0073
LYS 2820.0083
ASN 2830.0050
ALA 2840.0027
MET 2850.0034
ARG 2860.0035
ALA 2870.0018
THR 2880.0036
MET 2890.0043
GLU 2900.0027
HIS 2910.0055
HIS 2920.0061
ALA 2930.0312
ASN 2940.0522
ARG 2950.0300
GLY 2960.0282
VAL 2970.0097
TYR 2980.0077
PRO 2990.0041
PRO 3000.0032
ILE 3010.0041
GLN 3020.0070
VAL 3030.0113
HIS 3040.0135
VAL 3050.0158
THR 3060.0143
LEU 3070.0136
GLY 3080.0163
ASN 3090.0414
GLU 3100.0203
ASP 3110.0142
LEU 3120.0113
THR 3130.0133
VAL 3140.0112
LYS 3150.0130
MET 3160.0087
SER 3170.0099
ASP 3180.0092
ARG 3190.0086
GLY 3200.0062
GLY 3210.0162
GLY 3220.0233
VAL 3230.0352
PRO 3240.0309
LEU 3250.0271
ARG 3260.0308
LYS 3270.0289
ILE 3280.0278
ASP 3290.0206
ARG 3300.0223
LEU 3310.0181
PHE 3320.0172
ASN 3330.0125
TYR 3340.0103
MET 3350.0137
TYR 3360.0148
SER 3370.0105
THR 3380.0051
ALA 3390.0023
PRO 3400.0079
ARG 3410.0100
PRO 3420.0136
ARG 3430.0294
VAL 3440.0295
GLU 3450.0214
THR 3460.0225
SER 3470.0341
ARG 3480.0308
ALA 3490.0162
VAL 3500.0171
PRO 3510.0120
LEU 3520.0117
ALA 3530.0082
GLY 3540.0027
PHE 3550.0033
GLY 3560.0029
TYR 3570.0048
GLY 3580.0058
LEU 3590.0086
PRO 3600.0078
ILE 3610.0063
SER 3620.0068
ARG 3630.0081
LEU 3640.0067
TYR 3650.0077
ALA 3660.0062
GLN 3670.0091
TYR 3680.0111
PHE 3690.0157
GLN 3700.0138
GLY 3710.0027
ASP 3720.0025
LEU 3730.0097
LYS 3740.0161
LEU 3750.0224
TYR 3760.0227
TYR 3760.0224
SER 3770.0238
LEU 3780.0207
GLU 3790.0280
GLY 3800.0255
TYR 3810.0190
GLY 3820.0179
THR 3830.0179
ASP 3840.0178
ALA 3850.0134
VAL 3860.0140
ILE 3870.0075
TYR 3880.0087
ILE 3890.0074
LYS 3900.0058
ALA 3910.0056
LEU 3920.0153
SER 3930.0224
THR 3940.0248
ASP 3950.0177
SER 3960.0208
ILE 3970.0211
GLU 3980.0189
ARG 3990.0171
LEU 4000.0153
PRO 4010.0130
VAL 4020.0122
TYR 4030.0171
ASN 4040.0186
LYS 4050.0355
ALA 4060.0216
ALA 4070.0143
TRP 4080.0230
LYS 4090.0260
HIS 4100.0150
TYR 4110.0150
ASN 4120.0190
THR 4130.0219
ASN 4140.0205
ALA 4170.0045
ASP 4180.0043
ASP 4190.0020
TRP 4200.0025
CYS 4210.0048
VAL 4220.0032
PRO 4230.0035

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.