CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1391
GLY 410.0236
VAL 420.0198
PRO 430.0149
GLY 440.0098
GLN 450.0056
VAL 460.0060
ASP 470.0056
PHE 480.0064
TYR 490.0047
ALA 500.0043
ARG 510.0075
PHE 520.0069
SER 530.0035
PRO 540.0037
SER 550.0026
PRO 560.0031
LEU 570.0009
SER 580.0037
MET 590.0079
LYS 600.0075
GLN 610.0055
PHE 620.0083
LEU 630.0124
ASP 640.0225
PHE 650.0172
GLY 660.0318
SER 670.1391
CYS 710.0119
GLU 720.0034
LYS 730.0096
THR 740.0044
SER 750.0071
PHE 760.0067
MET 770.0068
PHE 780.0066
LEU 790.0082
ARG 800.0065
GLN 810.0071
GLU 820.0067
LEU 830.0062
PRO 840.0054
VAL 850.0040
ARG 860.0041
LEU 870.0045
ALA 880.0034
ASN 890.0018
ILE 900.0015
MET 910.0019
LYS 920.0013
GLU 930.0046
ILE 940.0053
SER 950.0061
LEU 960.0072
LEU 970.0083
PRO 980.0082
ASP 990.0101
ASN 1000.0066
LEU 1010.0076
LEU 1020.0088
ARG 1030.0104
THR 1040.0065
PRO 1050.0063
SER 1060.0063
VAL 1070.0069
GLN 1080.0067
LEU 1090.0045
VAL 1100.0048
GLN 1110.0042
SER 1120.0040
TRP 1130.0047
TYR 1140.0043
ILE 1150.0057
GLN 1160.0070
SER 1170.0068
LEU 1180.0068
GLN 1190.0063
GLU 1200.0064
LEU 1210.0066
LEU 1220.0066
ASP 1230.0064
PHE 1240.0078
LYS 1250.0116
ASP 1260.0216
LYS 1270.0210
SER 1280.0241
ALA 1290.0201
GLU 1300.0299
ASP 1310.0184
ALA 1320.0133
LYS 1330.0063
ALA 1340.0077
ILE 1350.0082
TYR 1360.0098
ASP 1370.0069
PHE 1380.0058
THR 1390.0061
ASP 1400.0066
THR 1410.0068
VAL 1420.0065
ILE 1430.0064
ARG 1440.0083
ILE 1450.0085
ARG 1460.0069
ASN 1470.0085
ARG 1480.0097
HIS 1490.0070
ASN 1500.0068
ASP 1510.0045
VAL 1520.0019
ILE 1530.0033
PRO 1540.0038
THR 1550.0038
MET 1560.0047
ALA 1570.0049
GLN 1580.0043
GLY 1590.0058
VAL 1600.0051
ILE 1610.0036
GLU 1620.0039
TYR 1630.0041
LYS 1640.0025
GLU 1650.0046
SER 1660.0086
PHE 1670.0047
ASP 1700.0048
PRO 1710.0078
VAL 1720.0046
THR 1730.0044
SER 1740.0065
GLN 1750.0067
ASN 1760.0061
VAL 1770.0061
GLN 1780.0044
TYR 1790.0044
PHE 1800.0054
LEU 1810.0052
ASP 1820.0035
ARG 1830.0036
PHE 1840.0036
TYR 1850.0038
MET 1860.0047
SER 1870.0026
ARG 1880.0016
ILE 1890.0031
SER 1900.0014
ILE 1910.0033
ARG 1920.0027
MET 1930.0022
LEU 1940.0033
LEU 1950.0032
ASN 1960.0059
GLN 1970.0102
HIS 1980.0041
SER 1990.0051
LEU 2000.0147
LEU 2010.0148
PHE 2020.0076
GLY 2030.0097
HIS 2150.0328
ILE 2160.0249
GLY 2170.0198
SER 2180.0174
ILE 2190.0205
ASN 2200.0269
PRO 2210.0270
ASN 2220.0362
CYS 2230.0256
ASN 2240.0189
VAL 2250.0110
LEU 2260.0109
GLU 2270.0125
VAL 2280.0136
ILE 2290.0137
LYS 2300.0124
ASP 2310.0168
GLY 2320.0172
TYR 2330.0161
GLU 2340.0198
ASN 2350.0215
ALA 2360.0165
ARG 2370.0168
ARG 2380.0309
LEU 2390.0248
CYS 2400.0186
ASP 2410.0341
LEU 2420.0432
TYR 2430.0302
TYR 2440.0323
ILE 2450.0568
ASN 2460.0228
SER 2470.0122
PRO 2480.0113
GLU 2490.0084
LEU 2500.0083
GLU 2510.0115
LEU 2520.0108
GLU 2530.0097
GLU 2540.0106
LEU 2550.0199
ASN 2560.0219
ALA 2570.0345
LYS 2580.0294
SER 2590.0332
PRO 2600.0303
GLY 2610.0225
GLN 2620.0331
PRO 2630.0190
ILE 2640.0200
GLN 2650.0233
VAL 2660.0231
VAL 2670.0244
TYR 2680.0182
VAL 2690.0180
PRO 2700.0189
SER 2710.0128
HIS 2720.0079
LEU 2730.0101
TYR 2740.0115
HIS 2750.0104
HIS 2750.0104
MET 2760.0100
VAL 2770.0151
PHE 2780.0154
GLU 2790.0140
LEU 2800.0134
PHE 2810.0134
LYS 2820.0117
ASN 2830.0125
ALA 2840.0126
MET 2850.0087
ARG 2860.0093
ALA 2870.0105
THR 2880.0119
MET 2890.0150
GLU 2900.0120
HIS 2910.0037
HIS 2920.0061
ALA 2930.0483
ASN 2940.0831
ARG 2950.0344
GLY 2960.0436
VAL 2970.0259
TYR 2980.0254
PRO 2990.0207
PRO 3000.0176
ILE 3010.0159
GLN 3020.0213
VAL 3030.0162
HIS 3040.0150
VAL 3050.0152
THR 3060.0171
LEU 3070.0187
GLY 3080.0198
ASN 3090.0134
GLU 3100.0151
ASP 3110.0114
LEU 3120.0118
THR 3130.0091
VAL 3140.0122
LYS 3150.0177
MET 3160.0165
SER 3170.0214
ASP 3180.0173
ARG 3190.0147
GLY 3200.0043
GLY 3210.0075
GLY 3220.0080
VAL 3230.0171
PRO 3240.0260
LEU 3250.0325
ARG 3260.0482
LYS 3270.0281
ILE 3280.0227
ASP 3290.0202
ARG 3300.0331
LEU 3310.0188
PHE 3320.0126
ASN 3330.0096
TYR 3340.0092
MET 3350.0092
TYR 3360.0247
SER 3370.0169
THR 3380.0120
ALA 3390.0084
PRO 3400.0030
ARG 3410.0058
PRO 3420.0083
ARG 3430.0191
VAL 3440.0169
GLU 3450.0067
THR 3460.0193
SER 3470.0256
ARG 3480.0303
ALA 3490.0218
VAL 3500.0181
PRO 3510.0129
LEU 3520.0103
ALA 3530.0058
GLY 3540.0081
PHE 3550.0063
GLY 3560.0059
TYR 3570.0065
GLY 3580.0069
LEU 3590.0102
PRO 3600.0067
ILE 3610.0086
SER 3620.0102
ARG 3630.0102
LEU 3640.0094
TYR 3650.0073
ALA 3660.0063
GLN 3670.0073
TYR 3680.0050
PHE 3690.0041
GLN 3700.0078
GLY 3710.0038
ASP 3720.0080
LEU 3730.0121
LYS 3740.0133
LEU 3750.0189
TYR 3760.0180
TYR 3760.0180
SER 3770.0161
LEU 3780.0118
GLU 3790.0167
GLY 3800.0231
TYR 3810.0157
GLY 3820.0132
THR 3830.0155
ASP 3840.0201
ALA 3850.0165
VAL 3860.0134
ILE 3870.0080
TYR 3880.0043
ILE 3890.0078
LYS 3900.0136
ALA 3910.0186
LEU 3920.0243
SER 3930.0208
THR 3940.0220
ASP 3950.0205
SER 3960.0123
ILE 3970.0070
GLU 3980.0036
ARG 3990.0064
LEU 4000.0048
PRO 4010.0035
VAL 4020.0023
TYR 4030.0022
ASN 4040.0033
LYS 4050.0069
ALA 4060.0035
ALA 4070.0018
TRP 4080.0049
LYS 4090.0032
HIS 4100.0032
TYR 4110.0051
ASN 4120.0053
THR 4130.0015
ASN 4140.0087
ALA 4170.0071
ASP 4180.0068
ASP 4190.0035
TRP 4200.0021
CYS 4210.0072
VAL 4220.0037
PRO 4230.0057

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.