CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0887
GLY 410.0192
VAL 420.0119
PRO 430.0069
GLY 440.0065
GLN 450.0059
VAL 460.0053
ASP 470.0090
PHE 480.0117
TYR 490.0086
ALA 500.0089
ARG 510.0139
PHE 520.0128
SER 530.0087
PRO 540.0060
SER 550.0038
PRO 560.0029
LEU 570.0042
SER 580.0056
MET 590.0059
LYS 600.0073
GLN 610.0072
PHE 620.0059
LEU 630.0073
ASP 640.0095
PHE 650.0062
GLY 660.0073
SER 670.0141
CYS 710.0045
GLU 720.0016
LYS 730.0007
THR 740.0022
SER 750.0017
PHE 760.0018
MET 770.0027
PHE 780.0027
LEU 790.0017
ARG 800.0021
GLN 810.0051
GLU 820.0037
LEU 830.0032
PRO 840.0044
VAL 850.0065
ARG 860.0044
LEU 870.0047
ALA 880.0059
ASN 890.0069
ILE 900.0068
MET 910.0064
LYS 920.0077
GLU 930.0080
ILE 940.0070
SER 950.0086
LEU 960.0094
LEU 970.0092
PRO 980.0096
ASP 990.0163
ASN 1000.0133
LEU 1010.0059
LEU 1020.0059
ARG 1030.0144
THR 1040.0101
PRO 1050.0119
SER 1060.0080
VAL 1070.0049
GLN 1080.0089
LEU 1090.0082
VAL 1100.0046
GLN 1110.0031
SER 1120.0040
TRP 1130.0036
TYR 1140.0007
ILE 1150.0007
GLN 1160.0023
SER 1170.0027
LEU 1180.0027
GLN 1190.0037
GLU 1200.0034
LEU 1210.0025
LEU 1220.0041
ASP 1230.0022
PHE 1240.0019
LYS 1250.0039
ASP 1260.0027
LYS 1270.0054
SER 1280.0051
ALA 1290.0031
GLU 1300.0020
ASP 1310.0059
ALA 1320.0076
LYS 1330.0112
ALA 1340.0067
ILE 1350.0027
TYR 1360.0061
ASP 1370.0047
PHE 1380.0024
THR 1390.0016
ASP 1400.0023
THR 1410.0015
VAL 1420.0018
ILE 1430.0034
ARG 1440.0028
ILE 1450.0027
ARG 1460.0039
ASN 1470.0049
ARG 1480.0040
HIS 1490.0043
ASN 1500.0045
ASP 1510.0042
VAL 1520.0032
ILE 1530.0017
PRO 1540.0027
THR 1550.0040
MET 1560.0019
ALA 1570.0008
GLN 1580.0022
GLY 1590.0024
VAL 1600.0022
ILE 1610.0018
GLU 1620.0041
TYR 1630.0042
LYS 1640.0049
GLU 1650.0079
SER 1660.0134
PHE 1670.0119
ASP 1700.0385
PRO 1710.0353
VAL 1720.0197
THR 1730.0101
SER 1740.0160
GLN 1750.0161
ASN 1760.0067
VAL 1770.0073
GLN 1780.0032
TYR 1790.0037
PHE 1800.0048
LEU 1810.0045
ASP 1820.0032
ARG 1830.0043
PHE 1840.0033
TYR 1850.0027
MET 1860.0021
SER 1870.0027
ARG 1880.0020
ILE 1890.0018
SER 1900.0029
ILE 1910.0029
ARG 1920.0035
MET 1930.0034
LEU 1940.0026
LEU 1950.0029
ASN 1960.0043
GLN 1970.0047
HIS 1980.0033
SER 1990.0040
LEU 2000.0052
LEU 2010.0054
PHE 2020.0043
GLY 2030.0048
HIS 2150.0065
ILE 2160.0057
GLY 2170.0060
SER 2180.0057
ILE 2190.0053
ASN 2200.0057
PRO 2210.0061
ASN 2220.0076
CYS 2230.0054
ASN 2240.0048
VAL 2250.0041
LEU 2260.0040
GLU 2270.0054
VAL 2280.0052
ILE 2290.0050
LYS 2300.0054
ASP 2310.0064
GLY 2320.0054
TYR 2330.0057
GLU 2340.0062
ASN 2350.0062
ALA 2360.0046
ARG 2370.0042
ARG 2380.0067
LEU 2390.0052
CYS 2400.0026
ASP 2410.0059
LEU 2420.0087
TYR 2430.0049
TYR 2440.0055
ILE 2450.0111
ASN 2460.0035
SER 2470.0012
PRO 2480.0035
GLU 2490.0030
LEU 2500.0040
GLU 2510.0038
LEU 2520.0036
GLU 2530.0044
GLU 2540.0034
LEU 2550.0087
ASN 2560.0056
ALA 2570.0134
LYS 2580.0126
SER 2590.0076
PRO 2600.0159
GLY 2610.0213
GLN 2620.0154
PRO 2630.0074
ILE 2640.0039
GLN 2650.0052
VAL 2660.0052
VAL 2670.0048
TYR 2680.0043
VAL 2690.0042
PRO 2700.0039
SER 2710.0031
HIS 2720.0028
LEU 2730.0034
TYR 2740.0032
HIS 2750.0016
HIS 2750.0016
MET 2760.0020
VAL 2770.0035
PHE 2780.0032
GLU 2790.0011
LEU 2800.0019
PHE 2810.0034
LYS 2820.0024
ASN 2830.0029
ALA 2840.0036
MET 2850.0032
ARG 2860.0038
ALA 2870.0051
THR 2880.0051
MET 2890.0054
GLU 2900.0057
HIS 2910.0052
HIS 2920.0051
ALA 2930.0127
ASN 2940.0156
ARG 2950.0067
GLY 2960.0102
VAL 2970.0084
TYR 2980.0076
PRO 2990.0059
PRO 3000.0047
ILE 3010.0043
GLN 3020.0047
VAL 3030.0036
HIS 3040.0034
VAL 3050.0029
THR 3060.0042
LEU 3070.0051
GLY 3080.0090
ASN 3090.0130
GLU 3100.0040
ASP 3110.0017
LEU 3120.0016
THR 3130.0022
VAL 3140.0021
LYS 3150.0020
MET 3160.0022
SER 3170.0035
ASP 3180.0035
ARG 3190.0049
GLY 3200.0038
GLY 3210.0044
GLY 3220.0037
VAL 3230.0035
PRO 3240.0058
LEU 3250.0077
ARG 3260.0058
LYS 3270.0045
ILE 3280.0057
ASP 3290.0051
ARG 3300.0047
LEU 3310.0043
PHE 3320.0034
ASN 3330.0029
TYR 3340.0040
MET 3350.0054
TYR 3360.0058
SER 3370.0042
THR 3380.0041
ALA 3390.0028
PRO 3400.0012
ARG 3410.0010
PRO 3420.0009
ARG 3430.0052
VAL 3440.0049
GLU 3450.0034
THR 3460.0050
SER 3470.0039
ARG 3480.0045
ALA 3490.0043
VAL 3500.0030
PRO 3510.0007
LEU 3520.0018
ALA 3530.0030
GLY 3540.0030
PHE 3550.0020
GLY 3560.0016
TYR 3570.0019
GLY 3580.0022
LEU 3590.0026
PRO 3600.0024
ILE 3610.0021
SER 3620.0021
ARG 3630.0026
LEU 3640.0025
TYR 3650.0026
ALA 3660.0025
GLN 3670.0032
TYR 3680.0033
PHE 3690.0045
GLN 3700.0046
GLY 3710.0028
ASP 3720.0030
LEU 3730.0025
LYS 3740.0029
LEU 3750.0031
TYR 3760.0029
TYR 3760.0028
SER 3770.0021
LEU 3780.0038
GLU 3790.0073
GLY 3800.0060
TYR 3810.0025
GLY 3820.0028
THR 3830.0015
ASP 3840.0017
ALA 3850.0013
VAL 3860.0014
ILE 3870.0010
TYR 3880.0010
ILE 3890.0022
LYS 3900.0026
ALA 3910.0031
LEU 3920.0049
SER 3930.0054
THR 3940.0057
ASP 3950.0050
SER 3960.0053
ILE 3970.0052
GLU 3980.0039
ARG 3990.0023
LEU 4000.0029
PRO 4010.0054
VAL 4020.0065
TYR 4030.0086
ASN 4040.0057
LYS 4050.0048
ALA 4060.0035
ALA 4070.0053
TRP 4080.0078
LYS 4090.0093
HIS 4100.0084
TYR 4110.0097
ASN 4120.0122
THR 4130.0196
ASN 4140.0313
ALA 4170.0777
ASP 4180.0857
ASP 4190.0517
TRP 4200.0225
CYS 4210.0887
VAL 4220.0420
PRO 4230.0680

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.