CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0856
GLY 410.0474
VAL 420.0306
PRO 430.0204
GLY 440.0116
GLN 450.0153
VAL 460.0136
ASP 470.0291
PHE 480.0355
TYR 490.0259
ALA 500.0267
ARG 510.0446
PHE 520.0405
SER 530.0262
PRO 540.0179
SER 550.0130
PRO 560.0093
LEU 570.0113
SER 580.0116
MET 590.0120
LYS 600.0176
GLN 610.0180
PHE 620.0135
LEU 630.0152
ASP 640.0245
PHE 650.0159
GLY 660.0182
SER 670.0654
CYS 710.0092
GLU 720.0061
LYS 730.0059
THR 740.0053
SER 750.0037
PHE 760.0044
MET 770.0059
PHE 780.0056
LEU 790.0024
ARG 800.0058
GLN 810.0162
GLU 820.0102
LEU 830.0081
PRO 840.0130
VAL 850.0189
ARG 860.0121
LEU 870.0116
ALA 880.0155
ASN 890.0188
ILE 900.0172
MET 910.0148
LYS 920.0184
GLU 930.0196
ILE 940.0170
SER 950.0202
LEU 960.0236
LEU 970.0223
PRO 980.0225
ASP 990.0368
ASN 1000.0271
LEU 1010.0122
LEU 1020.0125
ARG 1030.0301
THR 1040.0228
PRO 1050.0253
SER 1060.0181
VAL 1070.0108
GLN 1080.0178
LEU 1090.0178
VAL 1100.0114
GLN 1110.0066
SER 1120.0109
TRP 1130.0116
TYR 1140.0045
ILE 1150.0067
GLN 1160.0114
SER 1170.0111
LEU 1180.0098
GLN 1190.0132
GLU 1200.0139
LEU 1210.0100
LEU 1220.0145
ASP 1230.0089
PHE 1240.0075
LYS 1250.0122
ASP 1260.0062
LYS 1270.0169
SER 1280.0169
ALA 1290.0131
GLU 1300.0161
ASP 1310.0128
ALA 1320.0105
LYS 1330.0242
ALA 1340.0180
ILE 1350.0079
TYR 1360.0187
ASP 1370.0161
PHE 1380.0101
THR 1390.0085
ASP 1400.0122
THR 1410.0092
VAL 1420.0090
ILE 1430.0131
ARG 1440.0130
ILE 1450.0122
ARG 1460.0140
ASN 1470.0167
ARG 1480.0150
HIS 1490.0133
ASN 1500.0138
ASP 1510.0100
VAL 1520.0094
ILE 1530.0068
PRO 1540.0076
THR 1550.0106
MET 1560.0065
ALA 1570.0067
GLN 1580.0080
GLY 1590.0081
VAL 1600.0078
ILE 1610.0094
GLU 1620.0108
TYR 1630.0102
LYS 1640.0075
GLU 1650.0122
SER 1660.0171
PHE 1670.0141
ASP 1700.0856
PRO 1710.0799
VAL 1720.0442
THR 1730.0227
SER 1740.0348
GLN 1750.0358
ASN 1760.0188
VAL 1770.0186
GLN 1780.0083
TYR 1790.0110
PHE 1800.0121
LEU 1810.0109
ASP 1820.0076
ARG 1830.0110
PHE 1840.0080
TYR 1850.0064
MET 1860.0073
SER 1870.0075
ARG 1880.0062
ILE 1890.0060
SER 1900.0090
ILE 1910.0082
ARG 1920.0106
MET 1930.0092
LEU 1940.0073
LEU 1950.0086
ASN 1960.0120
GLN 1970.0117
HIS 1980.0094
SER 1990.0114
LEU 2000.0138
LEU 2010.0122
PHE 2020.0114
GLY 2030.0148
HIS 2150.0126
ILE 2160.0081
GLY 2170.0141
SER 2180.0112
ILE 2190.0077
ASN 2200.0128
PRO 2210.0173
ASN 2220.0248
CYS 2230.0164
ASN 2240.0147
VAL 2250.0101
LEU 2260.0090
GLU 2270.0124
VAL 2280.0106
ILE 2290.0083
LYS 2300.0096
ASP 2310.0123
GLY 2320.0093
TYR 2330.0100
GLU 2340.0113
ASN 2350.0108
ALA 2360.0072
ARG 2370.0074
ARG 2380.0105
LEU 2390.0078
CYS 2400.0034
ASP 2410.0080
LEU 2420.0132
TYR 2430.0076
TYR 2440.0081
ILE 2450.0157
ASN 2460.0040
SER 2470.0038
PRO 2480.0080
GLU 2490.0090
LEU 2500.0091
GLU 2510.0082
LEU 2520.0062
GLU 2530.0129
GLU 2540.0096
LEU 2550.0198
ASN 2560.0131
ALA 2570.0288
LYS 2580.0275
SER 2590.0232
PRO 2600.0364
GLY 2610.0443
GLN 2620.0286
PRO 2630.0180
ILE 2640.0097
GLN 2650.0167
VAL 2660.0154
VAL 2670.0127
TYR 2680.0086
VAL 2690.0069
PRO 2700.0089
SER 2710.0078
HIS 2720.0052
LEU 2730.0055
TYR 2740.0057
HIS 2750.0033
HIS 2750.0033
MET 2760.0025
VAL 2770.0048
PHE 2780.0043
GLU 2790.0012
LEU 2800.0035
PHE 2810.0056
LYS 2820.0037
ASN 2830.0067
ALA 2840.0087
MET 2850.0075
ARG 2860.0083
ALA 2870.0122
THR 2880.0113
MET 2890.0114
GLU 2900.0138
HIS 2910.0126
HIS 2920.0108
ALA 2930.0215
ASN 2940.0245
ARG 2950.0150
GLY 2960.0115
VAL 2970.0087
TYR 2980.0092
PRO 2990.0094
PRO 3000.0090
ILE 3010.0090
GLN 3020.0085
VAL 3030.0052
HIS 3040.0053
VAL 3050.0039
THR 3060.0076
LEU 3070.0095
GLY 3080.0178
ASN 3090.0210
GLU 3100.0073
ASP 3110.0035
LEU 3120.0036
THR 3130.0030
VAL 3140.0023
LYS 3150.0026
MET 3160.0036
SER 3170.0077
ASP 3180.0077
ARG 3190.0108
GLY 3200.0097
GLY 3210.0101
GLY 3220.0089
VAL 3230.0101
PRO 3240.0128
LEU 3250.0103
ARG 3260.0062
LYS 3270.0097
ILE 3280.0078
ASP 3290.0063
ARG 3300.0061
LEU 3310.0058
PHE 3320.0045
ASN 3330.0055
TYR 3340.0082
MET 3350.0120
TYR 3360.0120
SER 3370.0078
THR 3380.0081
ALA 3390.0065
PRO 3400.0062
ARG 3410.0033
PRO 3420.0042
ARG 3430.0060
VAL 3440.0039
GLU 3450.0052
THR 3460.0064
SER 3470.0038
ARG 3480.0069
ALA 3490.0082
VAL 3500.0052
PRO 3510.0018
LEU 3520.0022
ALA 3530.0050
GLY 3540.0032
PHE 3550.0031
GLY 3560.0019
TYR 3570.0040
GLY 3580.0043
LEU 3590.0051
PRO 3600.0044
ILE 3610.0045
SER 3620.0048
ARG 3630.0058
LEU 3640.0057
TYR 3650.0058
ALA 3660.0055
GLN 3670.0072
TYR 3680.0076
PHE 3690.0078
GLN 3700.0077
GLY 3710.0063
ASP 3720.0064
LEU 3730.0053
LYS 3740.0054
LEU 3750.0050
TYR 3760.0043
TYR 3760.0043
SER 3770.0039
LEU 3780.0090
GLU 3790.0178
GLY 3800.0136
TYR 3810.0047
GLY 3820.0053
THR 3830.0030
ASP 3840.0041
ALA 3850.0029
VAL 3860.0032
ILE 3870.0027
TYR 3880.0027
ILE 3890.0046
LYS 3900.0045
ALA 3910.0086
LEU 3920.0097
SER 3930.0106
THR 3940.0123
ASP 3950.0074
SER 3960.0080
ILE 3970.0092
GLU 3980.0084
ARG 3990.0075
LEU 4000.0109
PRO 4010.0164
VAL 4020.0197
TYR 4030.0244
ASN 4040.0170
LYS 4050.0239
ALA 4060.0160
ALA 4070.0164
TRP 4080.0225
LYS 4090.0252
HIS 4100.0214
TYR 4110.0264
ASN 4120.0302
THR 4130.0436
ASN 4140.0570
ALA 4170.0319
ASP 4180.0360
ASP 4190.0251
TRP 4200.0143
CYS 4210.0305
VAL 4220.0175
PRO 4230.0239

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.