CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1015
GLY 410.0633
VAL 420.0457
PRO 430.0323
GLY 440.0192
GLN 450.0074
VAL 460.0106
ASP 470.0144
PHE 480.0150
TYR 490.0086
ALA 500.0124
ARG 510.0201
PHE 520.0144
SER 530.0067
PRO 540.0067
SER 550.0091
PRO 560.0124
LEU 570.0120
SER 580.0123
MET 590.0130
LYS 600.0167
GLN 610.0122
PHE 620.0120
LEU 630.0109
ASP 640.0103
PHE 650.0055
GLY 660.0191
SER 670.1015
CYS 710.0144
GLU 720.0092
LYS 730.0070
THR 740.0118
SER 750.0090
PHE 760.0067
MET 770.0086
PHE 780.0074
LEU 790.0088
ARG 800.0078
GLN 810.0090
GLU 820.0073
LEU 830.0080
PRO 840.0075
VAL 850.0066
ARG 860.0058
LEU 870.0059
ALA 880.0083
ASN 890.0072
ILE 900.0070
MET 910.0056
LYS 920.0084
GLU 930.0098
ILE 940.0115
SER 950.0146
LEU 960.0144
LEU 970.0179
PRO 980.0166
ASP 990.0208
ASN 1000.0086
LEU 1010.0122
LEU 1020.0176
ARG 1030.0243
THR 1040.0070
PRO 1050.0091
SER 1060.0110
VAL 1070.0145
GLN 1080.0147
LEU 1090.0125
VAL 1100.0110
GLN 1110.0093
SER 1120.0084
TRP 1130.0056
TYR 1140.0045
ILE 1150.0087
GLN 1160.0105
SER 1170.0102
LEU 1180.0102
GLN 1190.0120
GLU 1200.0133
LEU 1210.0116
LEU 1220.0105
ASP 1230.0113
PHE 1240.0093
LYS 1250.0090
ASP 1260.0101
LYS 1270.0140
SER 1280.0154
ALA 1290.0088
GLU 1300.0195
ASP 1310.0225
ALA 1320.0220
LYS 1330.0173
ALA 1340.0094
ILE 1350.0043
TYR 1360.0072
ASP 1370.0057
PHE 1380.0084
THR 1390.0094
ASP 1400.0115
THR 1410.0117
VAL 1420.0099
ILE 1430.0111
ARG 1440.0117
ILE 1450.0078
ARG 1460.0067
ASN 1470.0091
ARG 1480.0066
HIS 1490.0018
ASN 1500.0034
ASP 1510.0083
VAL 1520.0093
ILE 1530.0095
PRO 1540.0131
THR 1550.0126
MET 1560.0128
ALA 1570.0121
GLN 1580.0114
GLY 1590.0098
VAL 1600.0104
ILE 1610.0102
GLU 1620.0049
TYR 1630.0052
LYS 1640.0166
GLU 1650.0372
SER 1660.0514
PHE 1670.0359
ASP 1700.0202
PRO 1710.0231
VAL 1720.0166
THR 1730.0146
SER 1740.0190
GLN 1750.0173
ASN 1760.0138
VAL 1770.0138
GLN 1780.0074
TYR 1790.0076
PHE 1800.0084
LEU 1810.0080
ASP 1820.0027
ARG 1830.0032
PHE 1840.0046
TYR 1850.0042
MET 1860.0039
SER 1870.0051
ARG 1880.0045
ILE 1890.0045
SER 1900.0069
ILE 1910.0060
ARG 1920.0062
MET 1930.0080
LEU 1940.0056
LEU 1950.0052
ASN 1960.0076
GLN 1970.0074
HIS 1980.0048
SER 1990.0064
LEU 2000.0092
LEU 2010.0090
PHE 2020.0080
GLY 2030.0117
HIS 2150.0153
ILE 2160.0140
GLY 2170.0112
SER 2180.0120
ILE 2190.0113
ASN 2200.0115
PRO 2210.0180
ASN 2220.0203
CYS 2230.0152
ASN 2240.0210
VAL 2250.0205
LEU 2260.0214
GLU 2270.0213
VAL 2280.0160
ILE 2290.0141
LYS 2300.0134
ASP 2310.0125
GLY 2320.0125
TYR 2330.0088
GLU 2340.0134
ASN 2350.0151
ALA 2360.0115
ARG 2370.0073
ARG 2380.0134
LEU 2390.0132
CYS 2400.0095
ASP 2410.0069
LEU 2420.0126
TYR 2430.0184
TYR 2440.0151
ILE 2450.0134
ASN 2460.0130
SER 2470.0101
PRO 2480.0139
GLU 2490.0147
LEU 2500.0077
GLU 2510.0083
LEU 2520.0080
GLU 2530.0212
GLU 2540.0188
LEU 2550.0151
ASN 2560.0070
ALA 2570.0175
LYS 2580.0095
SER 2590.0243
PRO 2600.0298
GLY 2610.0275
GLN 2620.0260
PRO 2630.0308
ILE 2640.0202
GLN 2650.0197
VAL 2660.0136
VAL 2670.0118
TYR 2680.0074
VAL 2690.0057
PRO 2700.0049
SER 2710.0044
HIS 2720.0003
LEU 2730.0066
TYR 2740.0088
HIS 2750.0060
HIS 2750.0060
MET 2760.0063
VAL 2770.0094
PHE 2780.0109
GLU 2790.0072
LEU 2800.0057
PHE 2810.0058
LYS 2820.0071
ASN 2830.0038
ALA 2840.0070
MET 2850.0079
ARG 2860.0094
ALA 2870.0203
THR 2880.0190
MET 2890.0115
GLU 2900.0192
HIS 2910.0263
HIS 2920.0084
ALA 2930.0307
ASN 2940.0548
ARG 2950.0541
GLY 2960.0545
VAL 2970.0345
TYR 2980.0259
PRO 2990.0229
PRO 3000.0177
ILE 3010.0113
GLN 3020.0094
VAL 3030.0095
HIS 3040.0128
VAL 3050.0201
THR 3060.0205
LEU 3070.0199
GLY 3080.0211
ASN 3090.0358
GLU 3100.0186
ASP 3110.0143
LEU 3120.0158
THR 3130.0145
VAL 3140.0127
LYS 3150.0087
MET 3160.0076
SER 3170.0163
ASP 3180.0192
ARG 3190.0288
GLY 3200.0272
GLY 3210.0323
GLY 3220.0347
VAL 3230.0444
PRO 3240.0409
LEU 3250.0221
ARG 3260.0142
LYS 3270.0225
ILE 3280.0218
ASP 3290.0183
ARG 3300.0225
LEU 3310.0125
PHE 3320.0128
ASN 3330.0102
TYR 3340.0079
MET 3350.0124
TYR 3360.0125
SER 3370.0113
THR 3380.0134
ALA 3390.0158
PRO 3400.0135
ARG 3410.0166
PRO 3420.0179
ARG 3430.0341
VAL 3440.0320
GLU 3450.0174
THR 3460.0156
SER 3470.0231
ARG 3480.0253
ALA 3490.0214
VAL 3500.0264
PRO 3510.0249
LEU 3520.0171
ALA 3530.0158
GLY 3540.0197
PHE 3550.0147
GLY 3560.0154
TYR 3570.0081
GLY 3580.0069
LEU 3590.0050
PRO 3600.0050
ILE 3610.0029
SER 3620.0045
ARG 3630.0072
LEU 3640.0066
TYR 3650.0052
ALA 3660.0071
GLN 3670.0096
TYR 3680.0095
PHE 3690.0095
GLN 3700.0117
GLY 3710.0107
ASP 3720.0138
LEU 3730.0150
LYS 3740.0182
LEU 3750.0205
TYR 3760.0202
TYR 3760.0204
SER 3770.0277
LEU 3780.0275
GLU 3790.0418
GLY 3800.0395
TYR 3810.0366
GLY 3820.0295
THR 3830.0211
ASP 3840.0208
ALA 3850.0138
VAL 3860.0151
ILE 3870.0111
TYR 3880.0109
ILE 3890.0069
LYS 3900.0079
ALA 3910.0148
LEU 3920.0173
SER 3930.0151
THR 3940.0166
ASP 3950.0107
SER 3960.0117
ILE 3970.0142
GLU 3980.0122
ARG 3990.0125
LEU 4000.0106
PRO 4010.0060
VAL 4020.0052
TYR 4030.0096
ASN 4040.0081
LYS 4050.0138
ALA 4060.0095
ALA 4070.0032
TRP 4080.0052
LYS 4090.0037
HIS 4100.0093
TYR 4110.0096
ASN 4120.0064
THR 4130.0152
ASN 4140.0234
ALA 4170.0067
ASP 4180.0081
ASP 4190.0060
TRP 4200.0050
CYS 4210.0051
VAL 4220.0051
PRO 4230.0039

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.