CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0675
GLY 410.0461
VAL 420.0329
PRO 430.0221
GLY 440.0169
GLN 450.0089
VAL 460.0124
ASP 470.0235
PHE 480.0209
TYR 490.0126
ALA 500.0198
ARG 510.0272
PHE 520.0185
SER 530.0151
PRO 540.0138
SER 550.0073
PRO 560.0057
LEU 570.0047
SER 580.0058
MET 590.0051
LYS 600.0061
GLN 610.0049
PHE 620.0032
LEU 630.0030
ASP 640.0034
PHE 650.0037
GLY 660.0026
SER 670.0102
CYS 710.0075
GLU 720.0074
LYS 730.0089
THR 740.0095
SER 750.0077
PHE 760.0072
MET 770.0062
PHE 780.0056
LEU 790.0042
ARG 800.0048
GLN 810.0016
GLU 820.0045
LEU 830.0046
PRO 840.0053
VAL 850.0111
ARG 860.0123
LEU 870.0131
ALA 880.0142
ASN 890.0181
ILE 900.0168
MET 910.0149
LYS 920.0164
GLU 930.0120
ILE 940.0120
SER 950.0110
LEU 960.0067
LEU 970.0126
PRO 980.0136
ASP 990.0137
ASN 1000.0194
LEU 1010.0137
LEU 1020.0082
ARG 1030.0110
THR 1040.0098
PRO 1050.0072
SER 1060.0091
VAL 1070.0081
GLN 1080.0054
LEU 1090.0082
VAL 1100.0071
GLN 1110.0059
SER 1120.0062
TRP 1130.0077
TYR 1140.0058
ILE 1150.0043
GLN 1160.0054
SER 1170.0063
LEU 1180.0022
GLN 1190.0058
GLU 1200.0059
LEU 1210.0048
LEU 1220.0067
ASP 1230.0085
PHE 1240.0067
LYS 1250.0093
ASP 1260.0082
LYS 1270.0074
SER 1280.0103
ALA 1290.0109
GLU 1300.0139
ASP 1310.0101
ALA 1320.0061
LYS 1330.0111
ALA 1340.0072
ILE 1350.0042
TYR 1360.0070
ASP 1370.0032
PHE 1380.0038
THR 1390.0064
ASP 1400.0057
THR 1410.0056
VAL 1420.0059
ILE 1430.0072
ARG 1440.0074
ILE 1450.0061
ARG 1460.0062
ASN 1470.0083
ARG 1480.0083
HIS 1490.0084
ASN 1500.0092
ASP 1510.0098
VAL 1520.0080
ILE 1530.0068
PRO 1540.0094
THR 1550.0103
MET 1560.0099
ALA 1570.0118
GLN 1580.0123
GLY 1590.0129
VAL 1600.0134
ILE 1610.0105
GLU 1620.0054
TYR 1630.0160
LYS 1640.0145
GLU 1650.0268
SER 1660.0552
PHE 1670.0573
ASP 1700.0242
PRO 1710.0240
VAL 1720.0207
THR 1730.0180
SER 1740.0098
GLN 1750.0137
ASN 1760.0113
VAL 1770.0125
GLN 1780.0114
TYR 1790.0073
PHE 1800.0093
LEU 1810.0101
ASP 1820.0101
ARG 1830.0088
PHE 1840.0074
TYR 1850.0073
MET 1860.0077
SER 1870.0093
ARG 1880.0072
ILE 1890.0061
SER 1900.0064
ILE 1910.0066
ARG 1920.0039
MET 1930.0031
LEU 1940.0011
LEU 1950.0022
ASN 1960.0023
GLN 1970.0036
HIS 1980.0055
SER 1990.0063
LEU 2000.0057
LEU 2010.0063
PHE 2020.0073
GLY 2030.0077
HIS 2150.0041
ILE 2160.0037
GLY 2170.0051
SER 2180.0038
ILE 2190.0037
ASN 2200.0029
PRO 2210.0033
ASN 2220.0067
CYS 2230.0063
ASN 2240.0112
VAL 2250.0121
LEU 2260.0117
GLU 2270.0129
VAL 2280.0106
ILE 2290.0120
LYS 2300.0121
ASP 2310.0119
GLY 2320.0092
TYR 2330.0107
GLU 2340.0121
ASN 2350.0095
ALA 2360.0075
ARG 2370.0106
ARG 2380.0133
LEU 2390.0079
CYS 2400.0052
ASP 2410.0125
LEU 2420.0116
TYR 2430.0042
TYR 2440.0095
ILE 2450.0231
ASN 2460.0132
SER 2470.0047
PRO 2480.0014
GLU 2490.0076
LEU 2500.0088
GLU 2510.0088
LEU 2520.0089
GLU 2530.0124
GLU 2540.0124
LEU 2550.0178
ASN 2560.0219
ALA 2570.0253
LYS 2580.0301
SER 2590.0471
PRO 2600.0322
GLY 2610.0568
GLN 2620.0512
PRO 2630.0347
ILE 2640.0178
GLN 2650.0106
VAL 2660.0024
VAL 2670.0036
TYR 2680.0033
VAL 2690.0025
PRO 2700.0023
SER 2710.0045
HIS 2720.0055
LEU 2730.0043
TYR 2740.0041
HIS 2750.0087
HIS 2750.0087
MET 2760.0096
VAL 2770.0067
PHE 2780.0053
GLU 2790.0101
LEU 2800.0102
PHE 2810.0054
LYS 2820.0041
ASN 2830.0090
ALA 2840.0046
MET 2850.0051
ARG 2860.0093
ALA 2870.0150
THR 2880.0118
MET 2890.0071
GLU 2900.0159
HIS 2910.0295
HIS 2920.0089
ALA 2930.0384
ASN 2940.0504
ARG 2950.0437
GLY 2960.0675
VAL 2970.0451
TYR 2980.0274
PRO 2990.0164
PRO 3000.0044
ILE 3010.0031
GLN 3020.0060
VAL 3030.0084
HIS 3040.0058
VAL 3050.0075
THR 3060.0114
LEU 3070.0173
GLY 3080.0201
ASN 3090.0480
GLU 3100.0366
ASP 3110.0141
LEU 3120.0098
THR 3130.0073
VAL 3140.0064
LYS 3150.0111
MET 3160.0093
SER 3170.0076
ASP 3180.0045
ARG 3190.0163
GLY 3200.0219
GLY 3210.0364
GLY 3220.0273
VAL 3230.0434
PRO 3240.0270
LEU 3250.0076
ARG 3260.0180
LYS 3270.0323
ILE 3280.0420
ASP 3290.0245
ARG 3300.0313
LEU 3310.0312
PHE 3320.0276
ASN 3330.0117
TYR 3340.0110
MET 3350.0066
TYR 3360.0202
SER 3370.0127
THR 3380.0097
ALA 3390.0090
PRO 3400.0083
ARG 3410.0067
PRO 3420.0092
ARG 3430.0152
VAL 3440.0069
GLU 3450.0112
THR 3460.0082
SER 3470.0073
ARG 3480.0077
ALA 3490.0068
VAL 3500.0113
PRO 3510.0151
LEU 3520.0115
ALA 3530.0138
GLY 3540.0110
PHE 3550.0057
GLY 3560.0066
TYR 3570.0121
GLY 3580.0143
LEU 3590.0212
PRO 3600.0175
ILE 3610.0140
SER 3620.0146
ARG 3630.0191
LEU 3640.0128
TYR 3650.0097
ALA 3660.0107
GLN 3670.0121
TYR 3680.0068
PHE 3690.0060
GLN 3700.0083
GLY 3710.0089
ASP 3720.0170
LEU 3730.0235
LYS 3740.0318
LEU 3750.0432
TYR 3760.0417
TYR 3760.0411
SER 3770.0231
LEU 3780.0039
GLU 3790.0258
GLY 3800.0427
TYR 3810.0340
GLY 3820.0111
THR 3830.0137
ASP 3840.0241
ALA 3850.0200
VAL 3860.0195
ILE 3870.0083
TYR 3880.0061
ILE 3890.0054
LYS 3900.0085
ALA 3910.0128
LEU 3920.0199
SER 3930.0107
THR 3940.0110
ASP 3950.0133
SER 3960.0094
ILE 3970.0071
GLU 3980.0031
ARG 3990.0034
LEU 4000.0065
PRO 4010.0158
VAL 4020.0160
TYR 4030.0243
ASN 4040.0241
LYS 4050.0333
ALA 4060.0174
ALA 4070.0118
TRP 4080.0140
LYS 4090.0213
HIS 4100.0116
TYR 4110.0054
ASN 4120.0154
THR 4130.0198
ASN 4140.0304
ALA 4170.0018
ASP 4180.0023
ASP 4190.0017
TRP 4200.0021
CYS 4210.0012
VAL 4220.0021
PRO 4230.0008

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.