CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0755
GLY 410.0258
VAL 420.0196
PRO 430.0251
GLY 440.0109
GLN 450.0079
VAL 460.0094
ASP 470.0132
PHE 480.0095
TYR 490.0068
ALA 500.0086
ARG 510.0144
PHE 520.0093
SER 530.0089
PRO 540.0103
SER 550.0120
PRO 560.0157
LEU 570.0201
SER 580.0188
MET 590.0189
LYS 600.0243
GLN 610.0199
PHE 620.0136
LEU 630.0132
ASP 640.0163
PHE 650.0090
GLY 660.0052
SER 670.0755
CYS 710.0169
GLU 720.0149
LYS 730.0124
THR 740.0171
SER 750.0159
PHE 760.0141
MET 770.0141
PHE 780.0108
LEU 790.0109
ARG 800.0117
GLN 810.0059
GLU 820.0043
LEU 830.0036
PRO 840.0033
VAL 850.0063
ARG 860.0083
LEU 870.0048
ALA 880.0062
ASN 890.0077
ILE 900.0054
MET 910.0056
LYS 920.0055
GLU 930.0035
ILE 940.0030
SER 950.0052
LEU 960.0063
LEU 970.0106
PRO 980.0127
ASP 990.0286
ASN 1000.0151
LEU 1010.0096
LEU 1020.0121
ARG 1030.0237
THR 1040.0155
PRO 1050.0163
SER 1060.0089
VAL 1070.0062
GLN 1080.0113
LEU 1090.0093
VAL 1100.0054
GLN 1110.0055
SER 1120.0062
TRP 1130.0054
TYR 1140.0048
ILE 1150.0055
GLN 1160.0065
SER 1170.0089
LEU 1180.0064
GLN 1190.0093
GLU 1200.0131
LEU 1210.0106
LEU 1220.0082
ASP 1230.0145
PHE 1240.0157
LYS 1250.0123
ASP 1260.0147
LYS 1270.0124
SER 1280.0065
ALA 1290.0084
GLU 1300.0151
ASP 1310.0137
ALA 1320.0101
LYS 1330.0173
ALA 1340.0149
ILE 1350.0111
TYR 1360.0173
ASP 1370.0182
PHE 1380.0180
THR 1390.0178
ASP 1400.0193
THR 1410.0167
VAL 1420.0160
ILE 1430.0132
ARG 1440.0131
ILE 1450.0112
ARG 1460.0103
ASN 1470.0060
ARG 1480.0042
HIS 1490.0076
ASN 1500.0145
ASP 1510.0147
VAL 1520.0107
ILE 1530.0108
PRO 1540.0105
THR 1550.0084
MET 1560.0064
ALA 1570.0077
GLN 1580.0066
GLY 1590.0028
VAL 1600.0042
ILE 1610.0054
GLU 1620.0014
TYR 1630.0048
LYS 1640.0068
GLU 1650.0194
SER 1660.0281
PHE 1670.0199
ASP 1700.0330
PRO 1710.0332
VAL 1720.0179
THR 1730.0041
SER 1740.0084
GLN 1750.0092
ASN 1760.0057
VAL 1770.0046
GLN 1780.0057
TYR 1790.0058
PHE 1800.0033
LEU 1810.0020
ASP 1820.0052
ARG 1830.0064
PHE 1840.0066
TYR 1850.0073
MET 1860.0132
SER 1870.0137
ARG 1880.0135
ILE 1890.0136
SER 1900.0133
ILE 1910.0129
ARG 1920.0123
MET 1930.0094
LEU 1940.0036
LEU 1950.0081
ASN 1960.0109
GLN 1970.0077
HIS 1980.0131
SER 1990.0110
LEU 2000.0116
LEU 2010.0092
PHE 2020.0120
GLY 2030.0131
HIS 2150.0229
ILE 2160.0132
GLY 2170.0128
SER 2180.0132
ILE 2190.0079
ASN 2200.0141
PRO 2210.0202
ASN 2220.0242
CYS 2230.0098
ASN 2240.0108
VAL 2250.0087
LEU 2260.0120
GLU 2270.0098
VAL 2280.0026
ILE 2290.0079
LYS 2300.0071
ASP 2310.0086
GLY 2320.0131
TYR 2330.0125
GLU 2340.0086
ASN 2350.0110
ALA 2360.0121
ARG 2370.0035
ARG 2380.0076
LEU 2390.0071
CYS 2400.0033
ASP 2410.0143
LEU 2420.0201
TYR 2430.0115
TYR 2440.0131
ILE 2450.0299
ASN 2460.0215
SER 2470.0076
PRO 2480.0128
GLU 2490.0147
LEU 2500.0160
GLU 2510.0178
LEU 2520.0189
GLU 2530.0289
GLU 2540.0223
LEU 2550.0214
ASN 2560.0139
ALA 2570.0248
LYS 2580.0185
SER 2590.0264
PRO 2600.0302
GLY 2610.0200
GLN 2620.0023
PRO 2630.0140
ILE 2640.0073
GLN 2650.0091
VAL 2660.0079
VAL 2670.0129
TYR 2680.0068
VAL 2690.0057
PRO 2700.0064
SER 2710.0128
HIS 2720.0080
LEU 2730.0059
TYR 2740.0098
HIS 2750.0145
HIS 2750.0144
MET 2760.0111
VAL 2770.0154
PHE 2780.0170
GLU 2790.0197
LEU 2800.0193
PHE 2810.0161
LYS 2820.0170
ASN 2830.0189
ALA 2840.0172
MET 2850.0103
ARG 2860.0095
ALA 2870.0161
THR 2880.0128
MET 2890.0033
GLU 2900.0110
HIS 2910.0267
HIS 2920.0132
ALA 2930.0213
ASN 2940.0123
ARG 2950.0387
GLY 2960.0584
VAL 2970.0544
TYR 2980.0284
PRO 2990.0191
PRO 3000.0143
ILE 3010.0155
GLN 3020.0168
VAL 3030.0146
HIS 3040.0173
VAL 3050.0168
THR 3060.0161
LEU 3070.0131
GLY 3080.0156
ASN 3090.0177
GLU 3100.0189
ASP 3110.0147
LEU 3120.0122
THR 3130.0082
VAL 3140.0077
LYS 3150.0127
MET 3160.0158
SER 3170.0184
ASP 3180.0194
ARG 3190.0183
GLY 3200.0184
GLY 3210.0182
GLY 3220.0163
VAL 3230.0212
PRO 3240.0219
LEU 3250.0429
ARG 3260.0383
LYS 3270.0198
ILE 3280.0373
ASP 3290.0308
ARG 3300.0274
LEU 3310.0234
PHE 3320.0170
ASN 3330.0088
TYR 3340.0042
MET 3350.0057
TYR 3360.0081
SER 3370.0058
THR 3380.0061
ALA 3390.0069
PRO 3400.0113
ARG 3410.0152
PRO 3420.0138
ARG 3430.0439
VAL 3440.0292
GLU 3450.0331
THR 3460.0697
SER 3470.0590
ARG 3480.0498
ALA 3490.0298
VAL 3500.0250
PRO 3510.0165
LEU 3520.0062
ALA 3530.0106
GLY 3540.0109
PHE 3550.0094
GLY 3560.0087
TYR 3570.0097
GLY 3580.0151
LEU 3590.0149
PRO 3600.0063
ILE 3610.0067
SER 3620.0073
ARG 3630.0019
LEU 3640.0068
TYR 3650.0083
ALA 3660.0057
GLN 3670.0110
TYR 3680.0133
PHE 3690.0169
GLN 3700.0185
GLY 3710.0139
ASP 3720.0063
LEU 3730.0084
LYS 3740.0178
LEU 3750.0275
TYR 3760.0319
TYR 3760.0312
SER 3770.0315
LEU 3780.0294
GLU 3790.0187
GLY 3800.0172
TYR 3810.0249
GLY 3820.0239
THR 3830.0245
ASP 3840.0241
ALA 3850.0205
VAL 3860.0128
ILE 3870.0039
TYR 3880.0060
ILE 3890.0099
LYS 3900.0159
ALA 3910.0163
LEU 3920.0188
SER 3930.0213
THR 3940.0272
ASP 3950.0228
SER 3960.0206
ILE 3970.0199
GLU 3980.0200
ARG 3990.0204
LEU 4000.0200
PRO 4010.0139
VAL 4020.0101
TYR 4030.0104
ASN 4040.0115
LYS 4050.0175
ALA 4060.0180
ALA 4070.0103
TRP 4080.0051
LYS 4090.0057
HIS 4100.0093
TYR 4110.0064
ASN 4120.0060
THR 4130.0062
ASN 4140.0147
ALA 4170.0021
ASP 4180.0015
ASP 4190.0011
TRP 4200.0009
CYS 4210.0008
VAL 4220.0009
PRO 4230.0003

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.