CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0608
GLY 410.0232
VAL 420.0249
PRO 430.0327
GLY 440.0201
GLN 450.0038
VAL 460.0103
ASP 470.0215
PHE 480.0173
TYR 490.0082
ALA 500.0115
ARG 510.0227
PHE 520.0129
SER 530.0060
PRO 540.0052
SER 550.0036
PRO 560.0070
LEU 570.0068
SER 580.0112
MET 590.0099
LYS 600.0139
GLN 610.0128
PHE 620.0072
LEU 630.0115
ASP 640.0148
PHE 650.0118
GLY 660.0142
SER 670.0458
CYS 710.0134
GLU 720.0114
LYS 730.0065
THR 740.0096
SER 750.0100
PHE 760.0086
MET 770.0077
PHE 780.0072
LEU 790.0063
ARG 800.0057
GLN 810.0046
GLU 820.0028
LEU 830.0032
PRO 840.0037
VAL 850.0060
ARG 860.0064
LEU 870.0055
ALA 880.0067
ASN 890.0077
ILE 900.0065
MET 910.0038
LYS 920.0044
GLU 930.0034
ILE 940.0057
SER 950.0102
LEU 960.0128
LEU 970.0203
PRO 980.0243
ASP 990.0358
ASN 1000.0178
LEU 1010.0196
LEU 1020.0238
ARG 1030.0303
THR 1040.0075
PRO 1050.0055
SER 1060.0091
VAL 1070.0152
GLN 1080.0140
LEU 1090.0134
VAL 1100.0130
GLN 1110.0134
SER 1120.0124
TRP 1130.0099
TYR 1140.0074
ILE 1150.0084
GLN 1160.0081
SER 1170.0049
LEU 1180.0040
GLN 1190.0069
GLU 1200.0053
LEU 1210.0040
LEU 1220.0036
ASP 1230.0064
PHE 1240.0072
LYS 1250.0043
ASP 1260.0059
LYS 1270.0078
SER 1280.0035
ALA 1290.0063
GLU 1300.0128
ASP 1310.0115
ALA 1320.0147
LYS 1330.0208
ALA 1340.0112
ILE 1350.0048
TYR 1360.0055
ASP 1370.0091
PHE 1380.0079
THR 1390.0071
ASP 1400.0074
THR 1410.0044
VAL 1420.0042
ILE 1430.0046
ARG 1440.0055
ILE 1450.0057
ARG 1460.0069
ASN 1470.0105
ARG 1480.0124
HIS 1490.0140
ASN 1500.0150
ASP 1510.0144
VAL 1520.0141
ILE 1530.0108
PRO 1540.0121
THR 1550.0123
MET 1560.0122
ALA 1570.0107
GLN 1580.0103
GLY 1590.0120
VAL 1600.0123
ILE 1610.0114
GLU 1620.0084
TYR 1630.0106
LYS 1640.0149
GLU 1650.0253
SER 1660.0293
PHE 1670.0209
ASP 1700.0093
PRO 1710.0218
VAL 1720.0107
THR 1730.0075
SER 1740.0134
GLN 1750.0162
ASN 1760.0147
VAL 1770.0132
GLN 1780.0063
TYR 1790.0057
PHE 1800.0038
LEU 1810.0023
ASP 1820.0060
ARG 1830.0064
PHE 1840.0074
TYR 1850.0080
MET 1860.0128
SER 1870.0123
ARG 1880.0133
ILE 1890.0122
SER 1900.0109
ILE 1910.0105
ARG 1920.0088
MET 1930.0080
LEU 1940.0043
LEU 1950.0031
ASN 1960.0051
GLN 1970.0042
HIS 1980.0045
SER 1990.0059
LEU 2000.0058
LEU 2010.0070
PHE 2020.0110
GLY 2030.0125
HIS 2150.0216
ILE 2160.0129
GLY 2170.0090
SER 2180.0117
ILE 2190.0107
ASN 2200.0146
PRO 2210.0166
ASN 2220.0195
CYS 2230.0076
ASN 2240.0032
VAL 2250.0105
LEU 2260.0089
GLU 2270.0121
VAL 2280.0114
ILE 2290.0192
LYS 2300.0215
ASP 2310.0208
GLY 2320.0206
TYR 2330.0296
GLU 2340.0291
ASN 2350.0241
ALA 2360.0240
ARG 2370.0297
ARG 2380.0299
LEU 2390.0247
CYS 2400.0189
ASP 2410.0255
LEU 2420.0300
TYR 2430.0129
TYR 2440.0113
ILE 2450.0332
ASN 2460.0165
SER 2470.0190
PRO 2480.0243
GLU 2490.0295
LEU 2500.0284
GLU 2510.0273
LEU 2520.0171
GLU 2530.0095
GLU 2540.0107
LEU 2550.0127
ASN 2560.0181
ALA 2570.0207
LYS 2580.0236
SER 2590.0342
PRO 2600.0259
GLY 2610.0182
GLN 2620.0241
PRO 2630.0239
ILE 2640.0206
GLN 2650.0147
VAL 2660.0134
VAL 2670.0058
TYR 2680.0070
VAL 2690.0095
PRO 2700.0104
SER 2710.0130
HIS 2720.0136
LEU 2730.0116
TYR 2740.0088
HIS 2750.0128
HIS 2750.0128
MET 2760.0142
VAL 2770.0158
PHE 2780.0149
GLU 2790.0116
LEU 2800.0137
PHE 2810.0221
LYS 2820.0184
ASN 2830.0171
ALA 2840.0178
MET 2850.0197
ARG 2860.0173
ALA 2870.0242
THR 2880.0212
MET 2890.0198
GLU 2900.0287
HIS 2910.0284
HIS 2920.0196
ALA 2930.0347
ASN 2940.0391
ARG 2950.0351
GLY 2960.0343
VAL 2970.0188
TYR 2980.0173
PRO 2990.0177
PRO 3000.0209
ILE 3010.0212
GLN 3020.0185
VAL 3030.0144
HIS 3040.0123
VAL 3050.0123
THR 3060.0152
LEU 3070.0190
GLY 3080.0127
ASN 3090.0334
GLU 3100.0207
ASP 3110.0087
LEU 3120.0133
THR 3130.0139
VAL 3140.0121
LYS 3150.0109
MET 3160.0095
SER 3170.0081
ASP 3180.0088
ARG 3190.0183
GLY 3200.0175
GLY 3210.0236
GLY 3220.0303
VAL 3230.0526
PRO 3240.0513
LEU 3250.0608
ARG 3260.0534
LYS 3270.0309
ILE 3280.0307
ASP 3290.0224
ARG 3300.0160
LEU 3310.0133
PHE 3320.0116
ASN 3330.0032
TYR 3340.0027
MET 3350.0054
TYR 3360.0052
SER 3370.0035
THR 3380.0085
ALA 3390.0148
PRO 3400.0125
ARG 3410.0073
PRO 3420.0091
ARG 3430.0310
VAL 3440.0192
GLU 3450.0108
THR 3460.0265
SER 3470.0291
ARG 3480.0217
ALA 3490.0225
VAL 3500.0193
PRO 3510.0146
LEU 3520.0182
ALA 3530.0218
GLY 3540.0186
PHE 3550.0126
GLY 3560.0111
TYR 3570.0076
GLY 3580.0089
LEU 3590.0115
PRO 3600.0126
ILE 3610.0135
SER 3620.0141
ARG 3630.0143
LEU 3640.0145
TYR 3650.0152
ALA 3660.0155
GLN 3670.0131
TYR 3680.0130
PHE 3690.0116
GLN 3700.0139
GLY 3710.0169
ASP 3720.0151
LEU 3730.0148
LYS 3740.0152
LEU 3750.0199
TYR 3760.0206
TYR 3760.0207
SER 3770.0332
LEU 3780.0288
GLU 3790.0421
GLY 3800.0361
TYR 3810.0225
GLY 3820.0188
THR 3830.0177
ASP 3840.0151
ALA 3850.0158
VAL 3860.0169
ILE 3870.0152
TYR 3880.0163
ILE 3890.0121
LYS 3900.0053
ALA 3910.0083
LEU 3920.0149
SER 3930.0138
THR 3940.0204
ASP 3950.0209
SER 3960.0117
ILE 3970.0128
GLU 3980.0114
ARG 3990.0148
LEU 4000.0128
PRO 4010.0113
VAL 4020.0094
TYR 4030.0120
ASN 4040.0123
LYS 4050.0178
ALA 4060.0157
ALA 4070.0066
TRP 4080.0042
LYS 4090.0053
HIS 4100.0125
TYR 4110.0141
ASN 4120.0161
THR 4130.0123
ASN 4140.0259
ALA 4170.0024
ASP 4180.0028
ASP 4190.0029
TRP 4200.0038
CYS 4210.0016
VAL 4220.0037
PRO 4230.0010

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.