CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0801
GLY 410.0731
VAL 420.0509
PRO 430.0341
GLY 440.0266
GLN 450.0125
VAL 460.0153
ASP 470.0088
PHE 480.0093
TYR 490.0105
ALA 500.0105
ARG 510.0097
PHE 520.0115
SER 530.0114
PRO 540.0095
SER 550.0142
PRO 560.0138
LEU 570.0129
SER 580.0093
MET 590.0123
LYS 600.0192
GLN 610.0204
PHE 620.0181
LEU 630.0219
ASP 640.0289
PHE 650.0293
GLY 660.0310
SER 670.0801
CYS 710.0266
GLU 720.0199
LYS 730.0122
THR 740.0228
SER 750.0187
PHE 760.0135
MET 770.0147
PHE 780.0161
LEU 790.0107
ARG 800.0100
GLN 810.0083
GLU 820.0078
LEU 830.0040
PRO 840.0061
VAL 850.0082
ARG 860.0052
LEU 870.0069
ALA 880.0087
ASN 890.0082
ILE 900.0068
MET 910.0085
LYS 920.0083
GLU 930.0056
ILE 940.0055
SER 950.0071
LEU 960.0081
LEU 970.0043
PRO 980.0033
ASP 990.0175
ASN 1000.0136
LEU 1010.0043
LEU 1020.0071
ARG 1030.0150
THR 1040.0073
PRO 1050.0109
SER 1060.0064
VAL 1070.0060
GLN 1080.0088
LEU 1090.0054
VAL 1100.0061
GLN 1110.0092
SER 1120.0111
TRP 1130.0108
TYR 1140.0107
ILE 1150.0161
GLN 1160.0151
SER 1170.0102
LEU 1180.0101
GLN 1190.0080
GLU 1200.0056
LEU 1210.0026
LEU 1220.0042
ASP 1230.0068
PHE 1240.0087
LYS 1250.0107
ASP 1260.0119
LYS 1270.0204
SER 1280.0217
ALA 1290.0141
GLU 1300.0346
ASP 1310.0281
ALA 1320.0229
LYS 1330.0077
ALA 1340.0065
ILE 1350.0071
TYR 1360.0120
ASP 1370.0100
PHE 1380.0100
THR 1390.0111
ASP 1400.0095
THR 1410.0054
VAL 1420.0053
ILE 1430.0018
ARG 1440.0068
ILE 1450.0083
ARG 1460.0076
ASN 1470.0105
ARG 1480.0132
HIS 1490.0127
ASN 1500.0126
ASP 1510.0098
VAL 1520.0071
ILE 1530.0035
PRO 1540.0037
THR 1550.0022
MET 1560.0015
ALA 1570.0036
GLN 1580.0042
GLY 1590.0032
VAL 1600.0025
ILE 1610.0045
GLU 1620.0034
TYR 1630.0062
LYS 1640.0064
GLU 1650.0125
SER 1660.0140
PHE 1670.0190
ASP 1700.0242
PRO 1710.0269
VAL 1720.0138
THR 1730.0064
SER 1740.0123
GLN 1750.0094
ASN 1760.0048
VAL 1770.0053
GLN 1780.0042
TYR 1790.0040
PHE 1800.0031
LEU 1810.0030
ASP 1820.0016
ARG 1830.0014
PHE 1840.0012
TYR 1850.0021
MET 1860.0058
SER 1870.0027
ARG 1880.0051
ILE 1890.0051
SER 1900.0043
ILE 1910.0026
ARG 1920.0050
MET 1930.0034
LEU 1940.0042
LEU 1950.0023
ASN 1960.0027
GLN 1970.0052
HIS 1980.0101
SER 1990.0060
LEU 2000.0092
LEU 2010.0172
PHE 2020.0165
GLY 2030.0098
HIS 2150.0371
ILE 2160.0247
GLY 2170.0184
SER 2180.0169
ILE 2190.0113
ASN 2200.0126
PRO 2210.0197
ASN 2220.0202
CYS 2230.0112
ASN 2240.0194
VAL 2250.0246
LEU 2260.0251
GLU 2270.0216
VAL 2280.0097
ILE 2290.0124
LYS 2300.0107
ASP 2310.0073
GLY 2320.0099
TYR 2330.0123
GLU 2340.0162
ASN 2350.0161
ALA 2360.0135
ARG 2370.0149
ARG 2380.0188
LEU 2390.0119
CYS 2400.0068
ASP 2410.0094
LEU 2420.0025
TYR 2430.0081
TYR 2440.0136
ILE 2450.0228
ASN 2460.0208
SER 2470.0127
PRO 2480.0139
GLU 2490.0113
LEU 2500.0064
GLU 2510.0104
LEU 2520.0135
GLU 2530.0326
GLU 2540.0355
LEU 2550.0315
ASN 2560.0252
ALA 2570.0162
LYS 2580.0173
SER 2590.0234
PRO 2600.0158
GLY 2610.0574
GLN 2620.0492
PRO 2630.0355
ILE 2640.0358
GLN 2650.0271
VAL 2660.0234
VAL 2670.0047
TYR 2680.0060
VAL 2690.0106
PRO 2700.0115
SER 2710.0117
HIS 2720.0121
LEU 2730.0062
TYR 2740.0075
HIS 2750.0093
HIS 2750.0093
MET 2760.0094
VAL 2770.0069
PHE 2780.0088
GLU 2790.0048
LEU 2800.0046
PHE 2810.0075
LYS 2820.0073
ASN 2830.0058
ALA 2840.0073
MET 2850.0090
ARG 2860.0069
ALA 2870.0106
THR 2880.0114
MET 2890.0122
GLU 2900.0106
HIS 2910.0176
HIS 2920.0145
ALA 2930.0247
ASN 2940.0192
ARG 2950.0273
GLY 2960.0398
VAL 2970.0372
TYR 2980.0237
PRO 2990.0101
PRO 3000.0057
ILE 3010.0021
GLN 3020.0069
VAL 3030.0163
HIS 3040.0268
VAL 3050.0345
THR 3060.0357
LEU 3070.0325
GLY 3080.0154
ASN 3090.0423
GLU 3100.0247
ASP 3110.0057
LEU 3120.0176
THR 3130.0191
VAL 3140.0179
LYS 3150.0134
MET 3160.0071
SER 3170.0085
ASP 3180.0025
ARG 3190.0048
GLY 3200.0101
GLY 3210.0079
GLY 3220.0108
VAL 3230.0213
PRO 3240.0190
LEU 3250.0211
ARG 3260.0198
LYS 3270.0147
ILE 3280.0144
ASP 3290.0138
ARG 3300.0132
LEU 3310.0061
PHE 3320.0072
ASN 3330.0060
TYR 3340.0040
MET 3350.0050
TYR 3360.0066
SER 3370.0034
THR 3380.0015
ALA 3390.0068
PRO 3400.0074
ARG 3410.0038
PRO 3420.0018
ARG 3430.0155
VAL 3440.0102
GLU 3450.0041
THR 3460.0122
SER 3470.0024
ARG 3480.0073
ALA 3490.0133
VAL 3500.0192
PRO 3510.0170
LEU 3520.0097
ALA 3530.0073
GLY 3540.0084
PHE 3550.0056
GLY 3560.0047
TYR 3570.0047
GLY 3580.0064
LEU 3590.0056
PRO 3600.0066
ILE 3610.0072
SER 3620.0089
ARG 3630.0101
LEU 3640.0098
TYR 3650.0107
ALA 3660.0133
GLN 3670.0138
TYR 3680.0110
PHE 3690.0130
GLN 3700.0164
GLY 3710.0146
ASP 3720.0121
LEU 3730.0084
LYS 3740.0073
LEU 3750.0079
TYR 3760.0068
TYR 3760.0068
SER 3770.0094
LEU 3780.0046
GLU 3790.0117
GLY 3800.0123
TYR 3810.0032
GLY 3820.0069
THR 3830.0066
ASP 3840.0097
ALA 3850.0067
VAL 3860.0065
ILE 3870.0085
TYR 3880.0081
ILE 3890.0122
LYS 3900.0134
ALA 3910.0165
LEU 3920.0323
SER 3930.0184
THR 3940.0141
ASP 3950.0189
SER 3960.0151
ILE 3970.0115
GLU 3980.0107
ARG 3990.0135
LEU 4000.0110
PRO 4010.0063
VAL 4020.0094
TYR 4030.0088
ASN 4040.0094
LYS 4050.0112
ALA 4060.0064
ALA 4070.0056
TRP 4080.0092
LYS 4090.0087
HIS 4100.0096
TYR 4110.0094
ASN 4120.0125
THR 4130.0093
ASN 4140.0233
ALA 4170.0021
ASP 4180.0021
ASP 4190.0043
TRP 4200.0052
CYS 4210.0026
VAL 4220.0055
PRO 4230.0017

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.