CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1666
GLY 410.1666
VAL 420.1023
PRO 430.0097
GLY 440.0528
GLN 450.0115
VAL 460.0112
ASP 470.0212
PHE 480.0212
TYR 490.0100
ALA 500.0128
ARG 510.0153
PHE 520.0100
SER 530.0082
PRO 540.0083
SER 550.0080
PRO 560.0072
LEU 570.0065
SER 580.0066
MET 590.0051
LYS 600.0084
GLN 610.0068
PHE 620.0065
LEU 630.0081
ASP 640.0081
PHE 650.0035
GLY 660.0069
SER 670.0151
CYS 710.0171
GLU 720.0107
LYS 730.0088
THR 740.0139
SER 750.0078
PHE 760.0051
MET 770.0084
PHE 780.0071
LEU 790.0053
ARG 800.0040
GLN 810.0089
GLU 820.0077
LEU 830.0063
PRO 840.0067
VAL 850.0091
ARG 860.0086
LEU 870.0066
ALA 880.0101
ASN 890.0085
ILE 900.0077
MET 910.0075
LYS 920.0098
GLU 930.0023
ILE 940.0037
SER 950.0071
LEU 960.0067
LEU 970.0063
PRO 980.0075
ASP 990.0025
ASN 1000.0174
LEU 1010.0068
LEU 1020.0069
ARG 1030.0188
THR 1040.0067
PRO 1050.0139
SER 1060.0113
VAL 1070.0073
GLN 1080.0061
LEU 1090.0154
VAL 1100.0139
GLN 1110.0093
SER 1120.0130
TRP 1130.0145
TYR 1140.0090
ILE 1150.0021
GLN 1160.0044
SER 1170.0032
LEU 1180.0035
GLN 1190.0076
GLU 1200.0051
LEU 1210.0058
LEU 1220.0059
ASP 1230.0067
PHE 1240.0035
LYS 1250.0034
ASP 1260.0080
LYS 1270.0080
SER 1280.0117
ALA 1290.0077
GLU 1300.0193
ASP 1310.0166
ALA 1320.0171
LYS 1330.0104
ALA 1340.0043
ILE 1350.0049
TYR 1360.0074
ASP 1370.0052
PHE 1380.0049
THR 1390.0035
ASP 1400.0041
THR 1410.0045
VAL 1420.0020
ILE 1430.0072
ARG 1440.0058
ILE 1450.0100
ARG 1460.0141
ASN 1470.0182
ARG 1480.0189
HIS 1490.0245
ASN 1500.0266
ASP 1510.0302
VAL 1520.0201
ILE 1530.0126
PRO 1540.0122
THR 1550.0153
MET 1560.0108
ALA 1570.0064
GLN 1580.0123
GLY 1590.0137
VAL 1600.0133
ILE 1610.0117
GLU 1620.0126
TYR 1630.0156
LYS 1640.0170
GLU 1650.0207
SER 1660.0857
PHE 1670.0779
ASP 1700.0644
PRO 1710.0739
VAL 1720.0517
THR 1730.0178
SER 1740.0218
GLN 1750.0253
ASN 1760.0151
VAL 1770.0153
GLN 1780.0158
TYR 1790.0128
PHE 1800.0073
LEU 1810.0083
ASP 1820.0078
ARG 1830.0047
PHE 1840.0040
TYR 1850.0063
MET 1860.0027
SER 1870.0046
ARG 1880.0079
ILE 1890.0076
SER 1900.0069
ILE 1910.0094
ARG 1920.0134
MET 1930.0095
LEU 1940.0064
LEU 1950.0088
ASN 1960.0120
GLN 1970.0098
HIS 1980.0065
SER 1990.0123
LEU 2000.0177
LEU 2010.0139
PHE 2020.0157
GLY 2030.0211
HIS 2150.0073
ILE 2160.0095
GLY 2170.0086
SER 2180.0087
ILE 2190.0062
ASN 2200.0049
PRO 2210.0064
ASN 2220.0042
CYS 2230.0059
ASN 2240.0049
VAL 2250.0050
LEU 2260.0052
GLU 2270.0059
VAL 2280.0063
ILE 2290.0032
LYS 2300.0026
ASP 2310.0052
GLY 2320.0069
TYR 2330.0061
GLU 2340.0046
ASN 2350.0063
ALA 2360.0064
ARG 2370.0051
ARG 2380.0049
LEU 2390.0059
CYS 2400.0040
ASP 2410.0050
LEU 2420.0080
TYR 2430.0097
TYR 2440.0093
ILE 2450.0108
ASN 2460.0096
SER 2470.0047
PRO 2480.0048
GLU 2490.0051
LEU 2500.0075
GLU 2510.0114
LEU 2520.0107
GLU 2530.0150
GLU 2540.0108
LEU 2550.0047
ASN 2560.0044
ALA 2570.0047
LYS 2580.0038
SER 2590.0094
PRO 2600.0062
GLY 2610.0217
GLN 2620.0163
PRO 2630.0113
ILE 2640.0084
GLN 2650.0067
VAL 2660.0061
VAL 2670.0053
TYR 2680.0052
VAL 2690.0044
PRO 2700.0055
SER 2710.0083
HIS 2720.0064
LEU 2730.0074
TYR 2740.0079
HIS 2750.0087
HIS 2750.0087
MET 2760.0082
VAL 2770.0070
PHE 2780.0070
GLU 2790.0060
LEU 2800.0050
PHE 2810.0049
LYS 2820.0046
ASN 2830.0039
ALA 2840.0028
MET 2850.0032
ARG 2860.0019
ALA 2870.0028
THR 2880.0027
MET 2890.0020
GLU 2900.0035
HIS 2910.0033
HIS 2920.0037
ALA 2930.0146
ASN 2940.0134
ARG 2950.0138
GLY 2960.0267
VAL 2970.0215
TYR 2980.0112
PRO 2990.0072
PRO 3000.0075
ILE 3010.0079
GLN 3020.0099
VAL 3030.0089
HIS 3040.0095
VAL 3050.0047
THR 3060.0035
LEU 3070.0025
GLY 3080.0017
ASN 3090.0063
GLU 3100.0058
ASP 3110.0050
LEU 3120.0036
THR 3130.0033
VAL 3140.0028
LYS 3150.0057
MET 3160.0063
SER 3170.0076
ASP 3180.0081
ARG 3190.0037
GLY 3200.0047
GLY 3210.0038
GLY 3220.0054
VAL 3230.0085
PRO 3240.0153
LEU 3250.0313
ARG 3260.0190
LYS 3270.0141
ILE 3280.0245
ASP 3290.0184
ARG 3300.0189
LEU 3310.0177
PHE 3320.0120
ASN 3330.0127
TYR 3340.0102
MET 3350.0124
TYR 3360.0182
SER 3370.0120
THR 3380.0091
ALA 3390.0190
PRO 3400.0261
ARG 3410.0154
PRO 3420.0161
ARG 3430.0096
VAL 3440.0225
GLU 3450.0108
THR 3460.0334
SER 3470.0119
ARG 3480.0131
ALA 3490.0209
VAL 3500.0167
PRO 3510.0121
LEU 3520.0061
ALA 3530.0097
GLY 3540.0151
PHE 3550.0117
GLY 3560.0087
TYR 3570.0055
GLY 3580.0086
LEU 3590.0071
PRO 3600.0073
ILE 3610.0074
SER 3620.0079
ARG 3630.0076
LEU 3640.0070
TYR 3650.0069
ALA 3660.0078
GLN 3670.0058
TYR 3680.0034
PHE 3690.0031
GLN 3700.0043
GLY 3710.0083
ASP 3720.0069
LEU 3730.0060
LYS 3740.0074
LEU 3750.0131
TYR 3760.0143
TYR 3760.0140
SER 3770.0148
LEU 3780.0109
GLU 3790.0132
GLY 3800.0094
TYR 3810.0055
GLY 3820.0065
THR 3830.0099
ASP 3840.0089
ALA 3850.0070
VAL 3860.0028
ILE 3870.0037
TYR 3880.0059
ILE 3890.0059
LYS 3900.0054
ALA 3910.0054
LEU 3920.0055
SER 3930.0049
THR 3940.0054
ASP 3950.0044
SER 3960.0036
ILE 3970.0033
GLU 3980.0033
ARG 3990.0023
LEU 4000.0040
PRO 4010.0033
VAL 4020.0055
TYR 4030.0092
ASN 4040.0181
LYS 4050.0445
ALA 4060.0442
ALA 4070.0170
TRP 4080.0084
LYS 4090.0235
HIS 4100.0314
TYR 4110.0225
ASN 4120.0320
THR 4130.0380
ASN 4140.0184
ALA 4170.0257
ASP 4180.0120
ASP 4190.0319
TRP 4200.0284
CYS 4210.0206
VAL 4220.0371
PRO 4230.0194

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.