CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 70  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1019
GLY 410.1019
VAL 420.0669
PRO 430.0312
GLY 440.0294
GLN 450.0196
VAL 460.0188
ASP 470.0141
PHE 480.0208
TYR 490.0145
ALA 500.0131
ARG 510.0209
PHE 520.0224
SER 530.0150
PRO 540.0097
SER 550.0023
PRO 560.0064
LEU 570.0098
SER 580.0139
MET 590.0129
LYS 600.0168
GLN 610.0145
PHE 620.0101
LEU 630.0081
ASP 640.0115
PHE 650.0063
GLY 660.0133
SER 670.0603
CYS 710.0109
GLU 720.0106
LYS 730.0058
THR 740.0109
SER 750.0090
PHE 760.0067
MET 770.0066
PHE 780.0058
LEU 790.0040
ARG 800.0036
GLN 810.0042
GLU 820.0045
LEU 830.0036
PRO 840.0040
VAL 850.0061
ARG 860.0060
LEU 870.0091
ALA 880.0089
ASN 890.0077
ILE 900.0063
MET 910.0090
LYS 920.0070
GLU 930.0039
ILE 940.0037
SER 950.0066
LEU 960.0065
LEU 970.0048
PRO 980.0045
ASP 990.0149
ASN 1000.0082
LEU 1010.0058
LEU 1020.0083
ARG 1030.0122
THR 1040.0103
PRO 1050.0143
SER 1060.0178
VAL 1070.0136
GLN 1080.0141
LEU 1090.0182
VAL 1100.0181
GLN 1110.0164
SER 1120.0152
TRP 1130.0149
TYR 1140.0149
ILE 1150.0162
GLN 1160.0138
SER 1170.0123
LEU 1180.0088
GLN 1190.0080
GLU 1200.0069
LEU 1210.0030
LEU 1220.0032
ASP 1230.0091
PHE 1240.0055
LYS 1250.0066
ASP 1260.0105
LYS 1270.0057
SER 1280.0061
ALA 1290.0064
GLU 1300.0092
ASP 1310.0083
ALA 1320.0084
LYS 1330.0094
ALA 1340.0053
ILE 1350.0034
TYR 1360.0058
ASP 1370.0036
PHE 1380.0063
THR 1390.0104
ASP 1400.0073
THR 1410.0086
VAL 1420.0109
ILE 1430.0101
ARG 1440.0106
ILE 1450.0118
ARG 1460.0105
ASN 1470.0095
ARG 1480.0145
HIS 1490.0154
ASN 1500.0107
ASP 1510.0114
VAL 1520.0119
ILE 1530.0092
PRO 1540.0102
THR 1550.0115
MET 1560.0111
ALA 1570.0112
GLN 1580.0110
GLY 1590.0122
VAL 1600.0096
ILE 1610.0080
GLU 1620.0064
TYR 1630.0030
LYS 1640.0039
GLU 1650.0103
SER 1660.0245
PHE 1670.0189
ASP 1700.0298
PRO 1710.0100
VAL 1720.0243
THR 1730.0139
SER 1740.0058
GLN 1750.0198
ASN 1760.0121
VAL 1770.0111
GLN 1780.0113
TYR 1790.0088
PHE 1800.0052
LEU 1810.0047
ASP 1820.0063
ARG 1830.0062
PHE 1840.0078
TYR 1850.0059
MET 1860.0055
SER 1870.0044
ARG 1880.0053
ILE 1890.0055
SER 1900.0043
ILE 1910.0050
ARG 1920.0070
MET 1930.0074
LEU 1940.0078
LEU 1950.0092
ASN 1960.0086
GLN 1970.0098
HIS 1980.0126
SER 1990.0125
LEU 2000.0129
LEU 2010.0132
PHE 2020.0136
GLY 2030.0143
HIS 2150.0093
ILE 2160.0081
GLY 2170.0086
SER 2180.0111
ILE 2190.0105
ASN 2200.0126
PRO 2210.0108
ASN 2220.0110
CYS 2230.0083
ASN 2240.0064
VAL 2250.0134
LEU 2260.0134
GLU 2270.0058
VAL 2280.0063
ILE 2290.0076
LYS 2300.0052
ASP 2310.0063
GLY 2320.0089
TYR 2330.0058
GLU 2340.0060
ASN 2350.0117
ALA 2360.0107
ARG 2370.0077
ARG 2380.0121
LEU 2390.0115
CYS 2400.0096
ASP 2410.0097
LEU 2420.0114
TYR 2430.0105
TYR 2440.0085
ILE 2450.0087
ASN 2460.0070
SER 2470.0031
PRO 2480.0054
GLU 2490.0118
LEU 2500.0132
GLU 2510.0219
LEU 2520.0230
GLU 2530.0265
GLU 2540.0251
LEU 2550.0164
ASN 2560.0144
ALA 2570.0194
LYS 2580.0301
SER 2590.0434
PRO 2600.0377
GLY 2610.0378
GLN 2620.0085
PRO 2630.0277
ILE 2640.0222
GLN 2650.0106
VAL 2660.0099
VAL 2670.0100
TYR 2680.0108
VAL 2690.0148
PRO 2700.0162
SER 2710.0180
HIS 2720.0155
LEU 2730.0138
TYR 2740.0131
HIS 2750.0145
HIS 2750.0145
MET 2760.0117
VAL 2770.0099
PHE 2780.0109
GLU 2790.0106
LEU 2800.0065
PHE 2810.0059
LYS 2820.0084
ASN 2830.0032
ALA 2840.0016
MET 2850.0054
ARG 2860.0050
ALA 2870.0054
THR 2880.0071
MET 2890.0080
GLU 2900.0067
HIS 2910.0081
HIS 2920.0110
ALA 2930.0125
ASN 2940.0159
ARG 2950.0143
GLY 2960.0230
VAL 2970.0176
TYR 2980.0129
PRO 2990.0115
PRO 3000.0123
ILE 3010.0106
GLN 3020.0148
VAL 3030.0192
HIS 3040.0217
VAL 3050.0236
THR 3060.0211
LEU 3070.0233
GLY 3080.0209
ASN 3090.0240
GLU 3100.0179
ASP 3110.0126
LEU 3120.0142
THR 3130.0135
VAL 3140.0136
LYS 3150.0110
MET 3160.0102
SER 3170.0081
ASP 3180.0078
ARG 3190.0078
GLY 3200.0100
GLY 3210.0119
GLY 3220.0068
VAL 3230.0075
PRO 3240.0059
LEU 3250.0124
ARG 3260.0195
LYS 3270.0087
ILE 3280.0120
ASP 3290.0098
ARG 3300.0208
LEU 3310.0140
PHE 3320.0127
ASN 3330.0115
TYR 3340.0080
MET 3350.0107
TYR 3360.0148
SER 3370.0057
THR 3380.0074
ALA 3390.0192
PRO 3400.0255
ARG 3410.0224
PRO 3420.0271
ARG 3430.0375
VAL 3440.0164
GLU 3450.0096
THR 3460.0334
SER 3470.0145
ARG 3480.0162
ALA 3490.0057
VAL 3500.0078
PRO 3510.0107
LEU 3520.0098
ALA 3530.0132
GLY 3540.0210
PHE 3550.0171
GLY 3560.0154
TYR 3570.0097
GLY 3580.0143
LEU 3590.0103
PRO 3600.0097
ILE 3610.0102
SER 3620.0116
ARG 3630.0110
LEU 3640.0116
TYR 3650.0121
ALA 3660.0124
GLN 3670.0121
TYR 3680.0106
PHE 3690.0116
GLN 3700.0121
GLY 3710.0070
ASP 3720.0062
LEU 3730.0067
LYS 3740.0086
LEU 3750.0181
TYR 3760.0190
TYR 3760.0189
SER 3770.0149
LEU 3780.0108
GLU 3790.0153
GLY 3800.0189
TYR 3810.0093
GLY 3820.0025
THR 3830.0111
ASP 3840.0146
ALA 3850.0122
VAL 3860.0095
ILE 3870.0035
TYR 3880.0034
ILE 3890.0015
LYS 3900.0063
ALA 3910.0142
LEU 3920.0149
SER 3930.0136
THR 3940.0143
ASP 3950.0150
SER 3960.0125
ILE 3970.0119
GLU 3980.0102
ARG 3990.0116
LEU 4000.0051
PRO 4010.0072
VAL 4020.0063
TYR 4030.0053
ASN 4040.0071
LYS 4050.0266
ALA 4060.0274
ALA 4070.0088
TRP 4080.0063
LYS 4090.0141
HIS 4100.0228
TYR 4110.0207
ASN 4120.0312
THR 4130.0404
ASN 4140.0169
ALA 4170.0062
ASP 4180.0033
ASP 4190.0034
TRP 4200.0017
CYS 4210.0011
VAL 4220.0015
PRO 4230.0008

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.