CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 73  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0570
GLY 410.0570
VAL 420.0320
PRO 430.0354
GLY 440.0164
GLN 450.0122
VAL 460.0118
ASP 470.0067
PHE 480.0106
TYR 490.0109
ALA 500.0080
ARG 510.0123
PHE 520.0122
SER 530.0125
PRO 540.0128
SER 550.0160
PRO 560.0151
LEU 570.0142
SER 580.0149
MET 590.0138
LYS 600.0281
GLN 610.0266
PHE 620.0198
LEU 630.0179
ASP 640.0230
PHE 650.0080
GLY 660.0076
SER 670.0104
CYS 710.0209
GLU 720.0194
LYS 730.0185
THR 740.0227
SER 750.0159
PHE 760.0135
MET 770.0159
PHE 780.0086
LEU 790.0119
ARG 800.0124
GLN 810.0118
GLU 820.0090
LEU 830.0072
PRO 840.0078
VAL 850.0099
ARG 860.0091
LEU 870.0072
ALA 880.0081
ASN 890.0069
ILE 900.0063
MET 910.0073
LYS 920.0051
GLU 930.0024
ILE 940.0023
SER 950.0038
LEU 960.0039
LEU 970.0028
PRO 980.0029
ASP 990.0058
ASN 1000.0068
LEU 1010.0067
LEU 1020.0046
ARG 1030.0037
THR 1040.0091
PRO 1050.0065
SER 1060.0083
VAL 1070.0081
GLN 1080.0065
LEU 1090.0115
VAL 1100.0098
GLN 1110.0131
SER 1120.0142
TRP 1130.0116
TYR 1140.0090
ILE 1150.0140
GLN 1160.0116
SER 1170.0054
LEU 1180.0049
GLN 1190.0131
GLU 1200.0116
LEU 1210.0108
LEU 1220.0101
ASP 1230.0168
PHE 1240.0176
LYS 1250.0167
ASP 1260.0279
LYS 1270.0205
SER 1280.0210
ALA 1290.0086
GLU 1300.0306
ASP 1310.0371
ALA 1320.0401
LYS 1330.0209
ALA 1340.0072
ILE 1350.0131
TYR 1360.0223
ASP 1370.0198
PHE 1380.0193
THR 1390.0204
ASP 1400.0248
THR 1410.0177
VAL 1420.0110
ILE 1430.0113
ARG 1440.0103
ILE 1450.0063
ARG 1460.0074
ASN 1470.0094
ARG 1480.0085
HIS 1490.0136
ASN 1500.0157
ASP 1510.0160
VAL 1520.0083
ILE 1530.0038
PRO 1540.0040
THR 1550.0031
MET 1560.0030
ALA 1570.0069
GLN 1580.0059
GLY 1590.0086
VAL 1600.0083
ILE 1610.0076
GLU 1620.0087
TYR 1630.0116
LYS 1640.0095
GLU 1650.0138
SER 1660.0139
PHE 1670.0143
ASP 1700.0192
PRO 1710.0193
VAL 1720.0127
THR 1730.0058
SER 1740.0026
GLN 1750.0051
ASN 1760.0019
VAL 1770.0032
GLN 1780.0070
TYR 1790.0064
PHE 1800.0059
LEU 1810.0056
ASP 1820.0087
ARG 1830.0087
PHE 1840.0083
TYR 1850.0070
MET 1860.0095
SER 1870.0122
ARG 1880.0120
ILE 1890.0080
SER 1900.0124
ILE 1910.0137
ARG 1920.0156
MET 1930.0154
LEU 1940.0133
LEU 1950.0110
ASN 1960.0188
GLN 1970.0185
HIS 1980.0086
SER 1990.0144
LEU 2000.0227
LEU 2010.0184
PHE 2020.0238
GLY 2030.0326
HIS 2150.0378
ILE 2160.0243
GLY 2170.0286
SER 2180.0255
ILE 2190.0126
ASN 2200.0179
PRO 2210.0262
ASN 2220.0362
CYS 2230.0162
ASN 2240.0081
VAL 2250.0123
LEU 2260.0163
GLU 2270.0255
VAL 2280.0197
ILE 2290.0170
LYS 2300.0198
ASP 2310.0174
GLY 2320.0145
TYR 2330.0077
GLU 2340.0077
ASN 2350.0121
ALA 2360.0100
ARG 2370.0168
ARG 2380.0365
LEU 2390.0302
CYS 2400.0124
ASP 2410.0260
LEU 2420.0313
TYR 2430.0109
TYR 2440.0125
ILE 2450.0351
ASN 2460.0103
SER 2470.0106
PRO 2480.0158
GLU 2490.0177
LEU 2500.0146
GLU 2510.0152
LEU 2520.0189
GLU 2530.0327
GLU 2540.0271
LEU 2550.0161
ASN 2560.0138
ALA 2570.0170
LYS 2580.0199
SER 2590.0186
PRO 2600.0304
GLY 2610.0267
GLN 2620.0353
PRO 2630.0275
ILE 2640.0115
GLN 2650.0187
VAL 2660.0231
VAL 2670.0196
TYR 2680.0144
VAL 2690.0060
PRO 2700.0072
SER 2710.0122
HIS 2720.0122
LEU 2730.0167
TYR 2740.0173
HIS 2750.0147
HIS 2750.0147
MET 2760.0142
VAL 2770.0155
PHE 2780.0117
GLU 2790.0113
LEU 2800.0115
PHE 2810.0093
LYS 2820.0075
ASN 2830.0100
ALA 2840.0109
MET 2850.0096
ARG 2860.0105
ALA 2870.0113
THR 2880.0108
MET 2890.0142
GLU 2900.0147
HIS 2910.0120
HIS 2920.0078
ALA 2930.0329
ASN 2940.0168
ARG 2950.0382
GLY 2960.0562
VAL 2970.0477
TYR 2980.0164
PRO 2990.0052
PRO 3000.0104
ILE 3010.0115
GLN 3020.0103
VAL 3030.0117
HIS 3040.0144
VAL 3050.0119
THR 3060.0127
LEU 3070.0062
GLY 3080.0091
ASN 3090.0433
GLU 3100.0102
ASP 3110.0115
LEU 3120.0089
THR 3130.0043
VAL 3140.0043
LYS 3150.0028
MET 3160.0055
SER 3170.0045
ASP 3180.0048
ARG 3190.0070
GLY 3200.0040
GLY 3210.0063
GLY 3220.0057
VAL 3230.0109
PRO 3240.0072
LEU 3250.0050
ARG 3260.0100
LYS 3270.0109
ILE 3280.0141
ASP 3290.0119
ARG 3300.0123
LEU 3310.0117
PHE 3320.0121
ASN 3330.0075
TYR 3340.0070
MET 3350.0038
TYR 3360.0089
SER 3370.0082
THR 3380.0053
ALA 3390.0126
PRO 3400.0121
ARG 3410.0150
PRO 3420.0176
ARG 3430.0413
VAL 3440.0327
GLU 3450.0260
THR 3460.0503
SER 3470.0261
ARG 3480.0306
ALA 3490.0271
VAL 3500.0400
PRO 3510.0398
LEU 3520.0227
ALA 3530.0209
GLY 3540.0276
PHE 3550.0116
GLY 3560.0130
TYR 3570.0093
GLY 3580.0098
LEU 3590.0106
PRO 3600.0105
ILE 3610.0099
SER 3620.0097
ARG 3630.0107
LEU 3640.0080
TYR 3650.0085
ALA 3660.0107
GLN 3670.0093
TYR 3680.0051
PHE 3690.0087
GLN 3700.0122
GLY 3710.0130
ASP 3720.0135
LEU 3730.0128
LYS 3740.0101
LEU 3750.0153
TYR 3760.0152
TYR 3760.0148
SER 3770.0138
LEU 3780.0138
GLU 3790.0037
GLY 3800.0099
TYR 3810.0133
GLY 3820.0088
THR 3830.0066
ASP 3840.0075
ALA 3850.0069
VAL 3860.0058
ILE 3870.0107
TYR 3880.0099
ILE 3890.0179
LYS 3900.0201
ALA 3910.0204
LEU 3920.0230
SER 3930.0226
THR 3940.0200
ASP 3950.0197
SER 3960.0153
ILE 3970.0055
GLU 3980.0067
ARG 3990.0092
LEU 4000.0152
PRO 4010.0102
VAL 4020.0075
TYR 4030.0019
ASN 4040.0028
LYS 4050.0181
ALA 4060.0136
ALA 4070.0048
TRP 4080.0059
LYS 4090.0059
HIS 4100.0122
TYR 4110.0118
ASN 4120.0183
THR 4130.0218
ASN 4140.0178
ALA 4170.0038
ASP 4180.0025
ASP 4190.0023
TRP 4200.0011
CYS 4210.0011
VAL 4220.0019
PRO 4230.0016

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.