CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0704
GLY 410.0704
VAL 420.0285
PRO 430.0438
GLY 440.0343
GLN 450.0184
VAL 460.0155
ASP 470.0196
PHE 480.0257
TYR 490.0148
ALA 500.0119
ARG 510.0219
PHE 520.0098
SER 530.0072
PRO 540.0094
SER 550.0142
PRO 560.0137
LEU 570.0158
SER 580.0165
MET 590.0120
LYS 600.0242
GLN 610.0249
PHE 620.0194
LEU 630.0197
ASP 640.0292
PHE 650.0202
GLY 660.0224
SER 670.0186
CYS 710.0134
GLU 720.0069
LYS 730.0085
THR 740.0095
SER 750.0049
PHE 760.0042
MET 770.0055
PHE 780.0078
LEU 790.0037
ARG 800.0074
GLN 810.0090
GLU 820.0087
LEU 830.0067
PRO 840.0076
VAL 850.0095
ARG 860.0105
LEU 870.0067
ALA 880.0053
ASN 890.0089
ILE 900.0107
MET 910.0110
LYS 920.0093
GLU 930.0131
ILE 940.0109
SER 950.0088
LEU 960.0080
LEU 970.0024
PRO 980.0106
ASP 990.0338
ASN 1000.0241
LEU 1010.0082
LEU 1020.0096
ARG 1030.0249
THR 1040.0167
PRO 1050.0140
SER 1060.0115
VAL 1070.0087
GLN 1080.0100
LEU 1090.0164
VAL 1100.0148
GLN 1110.0158
SER 1120.0208
TRP 1130.0206
TYR 1140.0181
ILE 1150.0197
GLN 1160.0226
SER 1170.0106
LEU 1180.0096
GLN 1190.0132
GLU 1200.0132
LEU 1210.0057
LEU 1220.0094
ASP 1230.0137
PHE 1240.0121
LYS 1250.0177
ASP 1260.0388
LYS 1270.0128
SER 1280.0120
ALA 1290.0160
GLU 1300.0205
ASP 1310.0140
ALA 1320.0128
LYS 1330.0018
ALA 1340.0013
ILE 1350.0063
TYR 1360.0130
ASP 1370.0089
PHE 1380.0060
THR 1390.0059
ASP 1400.0129
THR 1410.0119
VAL 1420.0099
ILE 1430.0156
ARG 1440.0198
ILE 1450.0186
ARG 1460.0155
ASN 1470.0228
ARG 1480.0246
HIS 1490.0241
ASN 1500.0216
ASP 1510.0220
VAL 1520.0150
ILE 1530.0074
PRO 1540.0114
THR 1550.0101
MET 1560.0058
ALA 1570.0058
GLN 1580.0039
GLY 1590.0045
VAL 1600.0048
ILE 1610.0075
GLU 1620.0066
TYR 1630.0084
LYS 1640.0154
GLU 1650.0526
SER 1660.0489
PHE 1670.0292
ASP 1700.0250
PRO 1710.0168
VAL 1720.0121
THR 1730.0116
SER 1740.0110
GLN 1750.0116
ASN 1760.0097
VAL 1770.0084
GLN 1780.0110
TYR 1790.0125
PHE 1800.0111
LEU 1810.0092
ASP 1820.0111
ARG 1830.0126
PHE 1840.0101
TYR 1850.0068
MET 1860.0081
SER 1870.0084
ARG 1880.0075
ILE 1890.0057
SER 1900.0109
ILE 1910.0105
ARG 1920.0094
MET 1930.0098
LEU 1940.0116
LEU 1950.0095
ASN 1960.0111
GLN 1970.0116
HIS 1980.0059
SER 1990.0040
LEU 2000.0083
LEU 2010.0090
PHE 2020.0053
GLY 2030.0121
HIS 2150.0233
ILE 2160.0191
GLY 2170.0173
SER 2180.0175
ILE 2190.0104
ASN 2200.0096
PRO 2210.0093
ASN 2220.0120
CYS 2230.0096
ASN 2240.0098
VAL 2250.0135
LEU 2260.0129
GLU 2270.0118
VAL 2280.0066
ILE 2290.0033
LYS 2300.0041
ASP 2310.0053
GLY 2320.0088
TYR 2330.0103
GLU 2340.0075
ASN 2350.0122
ALA 2360.0140
ARG 2370.0084
ARG 2380.0154
LEU 2390.0172
CYS 2400.0076
ASP 2410.0161
LEU 2420.0264
TYR 2430.0134
TYR 2440.0118
ILE 2450.0243
ASN 2460.0104
SER 2470.0042
PRO 2480.0119
GLU 2490.0069
LEU 2500.0085
GLU 2510.0100
LEU 2520.0073
GLU 2530.0163
GLU 2540.0184
LEU 2550.0196
ASN 2560.0140
ALA 2570.0132
LYS 2580.0071
SER 2590.0196
PRO 2600.0313
GLY 2610.0326
GLN 2620.0113
PRO 2630.0264
ILE 2640.0200
GLN 2650.0114
VAL 2660.0125
VAL 2670.0051
TYR 2680.0059
VAL 2690.0113
PRO 2700.0117
SER 2710.0110
HIS 2720.0101
LEU 2730.0055
TYR 2740.0063
HIS 2750.0095
HIS 2750.0094
MET 2760.0058
VAL 2770.0081
PHE 2780.0111
GLU 2790.0127
LEU 2800.0115
PHE 2810.0130
LYS 2820.0149
ASN 2830.0129
ALA 2840.0116
MET 2850.0102
ARG 2860.0087
ALA 2870.0130
THR 2880.0123
MET 2890.0122
GLU 2900.0124
HIS 2910.0117
HIS 2920.0050
ALA 2930.0168
ASN 2940.0073
ARG 2950.0207
GLY 2960.0269
VAL 2970.0184
TYR 2980.0101
PRO 2990.0097
PRO 3000.0125
ILE 3010.0126
GLN 3020.0120
VAL 3030.0035
HIS 3040.0043
VAL 3050.0114
THR 3060.0127
LEU 3070.0123
GLY 3080.0119
ASN 3090.0319
GLU 3100.0089
ASP 3110.0055
LEU 3120.0076
THR 3130.0068
VAL 3140.0042
LYS 3150.0057
MET 3160.0090
SER 3170.0133
ASP 3180.0124
ARG 3190.0017
GLY 3200.0098
GLY 3210.0287
GLY 3220.0326
VAL 3230.0398
PRO 3240.0405
LEU 3250.0495
ARG 3260.0225
LYS 3270.0070
ILE 3280.0228
ASP 3290.0260
ARG 3300.0186
LEU 3310.0113
PHE 3320.0128
ASN 3330.0143
TYR 3340.0114
MET 3350.0075
TYR 3360.0140
SER 3370.0129
THR 3380.0085
ALA 3390.0170
PRO 3400.0285
ARG 3410.0247
PRO 3420.0353
ARG 3430.0624
VAL 3440.0202
GLU 3450.0178
THR 3460.0590
SER 3470.0264
ARG 3480.0304
ALA 3490.0216
VAL 3500.0161
PRO 3510.0119
LEU 3520.0137
ALA 3530.0124
GLY 3540.0028
PHE 3550.0120
GLY 3560.0082
TYR 3570.0076
GLY 3580.0097
LEU 3590.0127
PRO 3600.0124
ILE 3610.0103
SER 3620.0114
ARG 3630.0130
LEU 3640.0129
TYR 3650.0118
ALA 3660.0121
GLN 3670.0139
TYR 3680.0110
PHE 3690.0102
GLN 3700.0132
GLY 3710.0100
ASP 3720.0111
LEU 3730.0074
LYS 3740.0054
LEU 3750.0094
TYR 3760.0105
TYR 3760.0108
SER 3770.0174
LEU 3780.0173
GLU 3790.0358
GLY 3800.0391
TYR 3810.0255
GLY 3820.0122
THR 3830.0116
ASP 3840.0133
ALA 3850.0065
VAL 3860.0049
ILE 3870.0044
TYR 3880.0062
ILE 3890.0073
LYS 3900.0090
ALA 3910.0077
LEU 3920.0091
SER 3930.0130
THR 3940.0164
ASP 3950.0135
SER 3960.0114
ILE 3970.0131
GLU 3980.0113
ARG 3990.0131
LEU 4000.0100
PRO 4010.0121
VAL 4020.0117
TYR 4030.0135
ASN 4040.0134
LYS 4050.0120
ALA 4060.0063
ALA 4070.0104
TRP 4080.0101
LYS 4090.0086
HIS 4100.0061
TYR 4110.0072
ASN 4120.0082
THR 4130.0101
ASN 4140.0165
ALA 4170.0029
ASP 4180.0004
ASP 4190.0005
TRP 4200.0006
CYS 4210.0025
VAL 4220.0037
PRO 4230.0032

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.