CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0660
GLY 410.0521
VAL 420.0385
PRO 430.0488
GLY 440.0283
GLN 450.0156
VAL 460.0146
ASP 470.0232
PHE 480.0313
TYR 490.0128
ALA 500.0050
ARG 510.0298
PHE 520.0082
SER 530.0039
PRO 540.0108
SER 550.0126
PRO 560.0115
LEU 570.0044
SER 580.0033
MET 590.0132
LYS 600.0174
GLN 610.0191
PHE 620.0196
LEU 630.0247
ASP 640.0247
PHE 650.0209
GLY 660.0223
SER 670.0385
CYS 710.0230
GLU 720.0160
LYS 730.0161
THR 740.0171
SER 750.0146
PHE 760.0111
MET 770.0103
PHE 780.0084
LEU 790.0126
ARG 800.0125
GLN 810.0179
GLU 820.0146
LEU 830.0138
PRO 840.0146
VAL 850.0094
ARG 860.0113
LEU 870.0130
ALA 880.0098
ASN 890.0101
ILE 900.0133
MET 910.0135
LYS 920.0120
GLU 930.0121
ILE 940.0118
SER 950.0104
LEU 960.0105
LEU 970.0052
PRO 980.0090
ASP 990.0320
ASN 1000.0180
LEU 1010.0143
LEU 1020.0172
ARG 1030.0258
THR 1040.0215
PRO 1050.0252
SER 1060.0206
VAL 1070.0152
GLN 1080.0184
LEU 1090.0097
VAL 1100.0110
GLN 1110.0140
SER 1120.0158
TRP 1130.0156
TYR 1140.0185
ILE 1150.0200
GLN 1160.0208
SER 1170.0161
LEU 1180.0134
GLN 1190.0148
GLU 1200.0151
LEU 1210.0151
LEU 1220.0129
ASP 1230.0137
PHE 1240.0117
LYS 1250.0120
ASP 1260.0147
LYS 1270.0125
SER 1280.0078
ALA 1290.0092
GLU 1300.0075
ASP 1310.0071
ALA 1320.0082
LYS 1330.0122
ALA 1340.0073
ILE 1350.0051
TYR 1360.0045
ASP 1370.0048
PHE 1380.0053
THR 1390.0041
ASP 1400.0096
THR 1410.0082
VAL 1420.0058
ILE 1430.0116
ARG 1440.0154
ILE 1450.0113
ARG 1460.0076
ASN 1470.0168
ARG 1480.0169
HIS 1490.0148
ASN 1500.0139
ASP 1510.0135
VAL 1520.0088
ILE 1530.0069
PRO 1540.0086
THR 1550.0081
MET 1560.0100
ALA 1570.0152
GLN 1580.0173
GLY 1590.0198
VAL 1600.0184
ILE 1610.0205
GLU 1620.0159
TYR 1630.0080
LYS 1640.0077
GLU 1650.0228
SER 1660.0250
PHE 1670.0223
ASP 1700.0660
PRO 1710.0428
VAL 1720.0488
THR 1730.0346
SER 1740.0192
GLN 1750.0268
ASN 1760.0117
VAL 1770.0072
GLN 1780.0075
TYR 1790.0066
PHE 1800.0048
LEU 1810.0028
ASP 1820.0059
ARG 1830.0095
PHE 1840.0084
TYR 1850.0072
MET 1860.0079
SER 1870.0090
ARG 1880.0079
ILE 1890.0080
SER 1900.0076
ILE 1910.0083
ARG 1920.0036
MET 1930.0041
LEU 1940.0023
LEU 1950.0021
ASN 1960.0098
GLN 1970.0130
HIS 1980.0075
SER 1990.0091
LEU 2000.0154
LEU 2010.0173
PHE 2020.0155
GLY 2030.0171
HIS 2150.0347
ILE 2160.0288
GLY 2170.0229
SER 2180.0199
ILE 2190.0172
ASN 2200.0154
PRO 2210.0171
ASN 2220.0157
CYS 2230.0102
ASN 2240.0156
VAL 2250.0150
LEU 2260.0159
GLU 2270.0212
VAL 2280.0223
ILE 2290.0188
LYS 2300.0176
ASP 2310.0173
GLY 2320.0179
TYR 2330.0121
GLU 2340.0075
ASN 2350.0089
ALA 2360.0116
ARG 2370.0120
ARG 2380.0119
LEU 2390.0133
CYS 2400.0115
ASP 2410.0147
LEU 2420.0130
TYR 2430.0076
TYR 2440.0141
ILE 2450.0232
ASN 2460.0195
SER 2470.0114
PRO 2480.0085
GLU 2490.0038
LEU 2500.0035
GLU 2510.0040
LEU 2520.0008
GLU 2530.0112
GLU 2540.0137
LEU 2550.0232
ASN 2560.0167
ALA 2570.0194
LYS 2580.0107
SER 2590.0202
PRO 2600.0369
GLY 2610.0275
GLN 2620.0217
PRO 2630.0110
ILE 2640.0101
GLN 2650.0076
VAL 2660.0064
VAL 2670.0106
TYR 2680.0109
VAL 2690.0152
PRO 2700.0155
SER 2710.0152
HIS 2720.0132
LEU 2730.0147
TYR 2740.0151
HIS 2750.0134
HIS 2750.0134
MET 2760.0096
VAL 2770.0137
PHE 2780.0133
GLU 2790.0117
LEU 2800.0104
PHE 2810.0086
LYS 2820.0072
ASN 2830.0073
ALA 2840.0052
MET 2850.0078
ARG 2860.0083
ALA 2870.0075
THR 2880.0073
MET 2890.0091
GLU 2900.0093
HIS 2910.0068
HIS 2920.0032
ALA 2930.0131
ASN 2940.0131
ARG 2950.0045
GLY 2960.0125
VAL 2970.0046
TYR 2980.0033
PRO 2990.0057
PRO 3000.0064
ILE 3010.0019
GLN 3020.0038
VAL 3030.0097
HIS 3040.0141
VAL 3050.0186
THR 3060.0199
LEU 3070.0159
GLY 3080.0127
ASN 3090.0186
GLU 3100.0083
ASP 3110.0068
LEU 3120.0099
THR 3130.0125
VAL 3140.0109
LYS 3150.0071
MET 3160.0070
SER 3170.0087
ASP 3180.0116
ARG 3190.0173
GLY 3200.0094
GLY 3210.0203
GLY 3220.0155
VAL 3230.0072
PRO 3240.0112
LEU 3250.0187
ARG 3260.0205
LYS 3270.0182
ILE 3280.0133
ASP 3290.0122
ARG 3300.0165
LEU 3310.0081
PHE 3320.0080
ASN 3330.0144
TYR 3340.0110
MET 3350.0191
TYR 3360.0257
SER 3370.0189
THR 3380.0196
ALA 3390.0239
PRO 3400.0269
ARG 3410.0213
PRO 3420.0243
ARG 3430.0404
VAL 3440.0355
GLU 3450.0312
THR 3460.0408
SER 3470.0384
ARG 3480.0294
ALA 3490.0214
VAL 3500.0301
PRO 3510.0180
LEU 3520.0080
ALA 3530.0073
GLY 3540.0200
PHE 3550.0179
GLY 3560.0100
TYR 3570.0059
GLY 3580.0052
LEU 3590.0088
PRO 3600.0082
ILE 3610.0092
SER 3620.0094
ARG 3630.0064
LEU 3640.0063
TYR 3650.0072
ALA 3660.0077
GLN 3670.0081
TYR 3680.0066
PHE 3690.0119
GLN 3700.0167
GLY 3710.0145
ASP 3720.0073
LEU 3730.0023
LYS 3740.0099
LEU 3750.0147
TYR 3760.0163
TYR 3760.0162
SER 3770.0101
LEU 3780.0029
GLU 3790.0251
GLY 3800.0446
TYR 3810.0293
GLY 3820.0204
THR 3830.0118
ASP 3840.0147
ALA 3850.0103
VAL 3860.0074
ILE 3870.0035
TYR 3880.0069
ILE 3890.0116
LYS 3900.0147
ALA 3910.0097
LEU 3920.0129
SER 3930.0142
THR 3940.0108
ASP 3950.0167
SER 3960.0142
ILE 3970.0102
GLU 3980.0087
ARG 3990.0095
LEU 4000.0125
PRO 4010.0161
VAL 4020.0129
TYR 4030.0184
ASN 4040.0194
LYS 4050.0275
ALA 4060.0191
ALA 4070.0191
TRP 4080.0213
LYS 4090.0215
HIS 4100.0200
TYR 4110.0150
ASN 4120.0163
THR 4130.0219
ASN 4140.0138
ALA 4170.0039
ASP 4180.0005
ASP 4190.0019
TRP 4200.0019
CYS 4210.0022
VAL 4220.0045
PRO 4230.0050

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.