CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0582
GLY 410.0193
VAL 420.0071
PRO 430.0123
GLY 440.0078
GLN 450.0030
VAL 460.0061
ASP 470.0069
PHE 480.0084
TYR 490.0060
ALA 500.0067
ARG 510.0067
PHE 520.0083
SER 530.0084
PRO 540.0048
SER 550.0042
PRO 560.0058
LEU 570.0074
SER 580.0078
MET 590.0076
LYS 600.0101
GLN 610.0110
PHE 620.0120
LEU 630.0103
ASP 640.0114
PHE 650.0220
GLY 660.0197
SER 670.0224
CYS 710.0485
GLU 720.0292
LYS 730.0231
THR 740.0344
SER 750.0230
PHE 760.0114
MET 770.0198
PHE 780.0185
LEU 790.0139
ARG 800.0114
GLN 810.0145
GLU 820.0124
LEU 830.0107
PRO 840.0088
VAL 850.0052
ARG 860.0065
LEU 870.0062
ALA 880.0071
ASN 890.0123
ILE 900.0139
MET 910.0111
LYS 920.0136
GLU 930.0149
ILE 940.0156
SER 950.0126
LEU 960.0142
LEU 970.0130
PRO 980.0164
ASP 990.0221
ASN 1000.0102
LEU 1010.0134
LEU 1020.0135
ARG 1030.0291
THR 1040.0231
PRO 1050.0149
SER 1060.0086
VAL 1070.0065
GLN 1080.0051
LEU 1090.0090
VAL 1100.0080
GLN 1110.0081
SER 1120.0138
TRP 1130.0133
TYR 1140.0108
ILE 1150.0091
GLN 1160.0094
SER 1170.0089
LEU 1180.0079
GLN 1190.0154
GLU 1200.0151
LEU 1210.0106
LEU 1220.0094
ASP 1230.0136
PHE 1240.0085
LYS 1250.0063
ASP 1260.0070
LYS 1270.0144
SER 1280.0119
ALA 1290.0171
GLU 1300.0382
ASP 1310.0231
ALA 1320.0427
LYS 1330.0574
ALA 1340.0119
ILE 1350.0056
TYR 1360.0180
ASP 1370.0104
PHE 1380.0099
THR 1390.0203
ASP 1400.0326
THR 1410.0225
VAL 1420.0172
ILE 1430.0197
ARG 1440.0272
ILE 1450.0212
ARG 1460.0150
ASN 1470.0111
ARG 1480.0170
HIS 1490.0207
ASN 1500.0236
ASP 1510.0276
VAL 1520.0147
ILE 1530.0131
PRO 1540.0118
THR 1550.0108
MET 1560.0106
ALA 1570.0161
GLN 1580.0171
GLY 1590.0187
VAL 1600.0195
ILE 1610.0278
GLU 1620.0193
TYR 1630.0172
LYS 1640.0186
GLU 1650.0410
SER 1660.0307
PHE 1670.0109
ASP 1700.0224
PRO 1710.0181
VAL 1720.0171
THR 1730.0190
SER 1740.0147
GLN 1750.0094
ASN 1760.0107
VAL 1770.0117
GLN 1780.0141
TYR 1790.0171
PHE 1800.0146
LEU 1810.0112
ASP 1820.0126
ARG 1830.0157
PHE 1840.0074
TYR 1850.0045
MET 1860.0061
SER 1870.0056
ARG 1880.0066
ILE 1890.0074
SER 1900.0061
ILE 1910.0073
ARG 1920.0112
MET 1930.0124
LEU 1940.0098
LEU 1950.0078
ASN 1960.0087
GLN 1970.0129
HIS 1980.0076
SER 1990.0113
LEU 2000.0140
LEU 2010.0248
PHE 2020.0341
GLY 2030.0428
HIS 2150.0295
ILE 2160.0205
GLY 2170.0172
SER 2180.0148
ILE 2190.0150
ASN 2200.0183
PRO 2210.0232
ASN 2220.0249
CYS 2230.0125
ASN 2240.0089
VAL 2250.0107
LEU 2260.0141
GLU 2270.0211
VAL 2280.0162
ILE 2290.0132
LYS 2300.0150
ASP 2310.0158
GLY 2320.0108
TYR 2330.0027
GLU 2340.0063
ASN 2350.0059
ALA 2360.0056
ARG 2370.0107
ARG 2380.0206
LEU 2390.0168
CYS 2400.0100
ASP 2410.0074
LEU 2420.0173
TYR 2430.0225
TYR 2440.0138
ILE 2450.0135
ASN 2460.0070
SER 2470.0038
PRO 2480.0064
GLU 2490.0083
LEU 2500.0035
GLU 2510.0073
LEU 2520.0117
GLU 2530.0116
GLU 2540.0113
LEU 2550.0064
ASN 2560.0069
ALA 2570.0044
LYS 2580.0162
SER 2590.0181
PRO 2600.0163
GLY 2610.0130
GLN 2620.0127
PRO 2630.0212
ILE 2640.0085
GLN 2650.0157
VAL 2660.0132
VAL 2670.0129
TYR 2680.0090
VAL 2690.0074
PRO 2700.0079
SER 2710.0116
HIS 2720.0096
LEU 2730.0127
TYR 2740.0139
HIS 2750.0130
HIS 2750.0130
MET 2760.0092
VAL 2770.0096
PHE 2780.0088
GLU 2790.0077
LEU 2800.0046
PHE 2810.0024
LYS 2820.0015
ASN 2830.0032
ALA 2840.0030
MET 2850.0029
ARG 2860.0032
ALA 2870.0065
THR 2880.0068
MET 2890.0049
GLU 2900.0057
HIS 2910.0081
HIS 2920.0077
ALA 2930.0094
ASN 2940.0121
ARG 2950.0095
GLY 2960.0093
VAL 2970.0046
TYR 2980.0056
PRO 2990.0055
PRO 3000.0056
ILE 3010.0036
GLN 3020.0062
VAL 3030.0121
HIS 3040.0127
VAL 3050.0097
THR 3060.0065
LEU 3070.0121
GLY 3080.0119
ASN 3090.0293
GLU 3100.0195
ASP 3110.0133
LEU 3120.0121
THR 3130.0099
VAL 3140.0112
LYS 3150.0110
MET 3160.0094
SER 3170.0069
ASP 3180.0035
ARG 3190.0056
GLY 3200.0089
GLY 3210.0124
GLY 3220.0108
VAL 3230.0097
PRO 3240.0176
LEU 3250.0260
ARG 3260.0209
LYS 3270.0085
ILE 3280.0094
ASP 3290.0110
ARG 3300.0065
LEU 3310.0020
PHE 3320.0048
ASN 3330.0046
TYR 3340.0055
MET 3350.0046
TYR 3360.0081
SER 3370.0117
THR 3380.0157
ALA 3390.0217
PRO 3400.0228
ARG 3410.0176
PRO 3420.0178
ARG 3430.0529
VAL 3440.0155
GLU 3450.0122
THR 3460.0519
SER 3470.0578
ARG 3480.0582
ALA 3490.0268
VAL 3500.0401
PRO 3510.0240
LEU 3520.0158
ALA 3530.0080
GLY 3540.0153
PHE 3550.0187
GLY 3560.0183
TYR 3570.0105
GLY 3580.0099
LEU 3590.0036
PRO 3600.0047
ILE 3610.0066
SER 3620.0047
ARG 3630.0047
LEU 3640.0047
TYR 3650.0019
ALA 3660.0049
GLN 3670.0104
TYR 3680.0061
PHE 3690.0097
GLN 3700.0160
GLY 3710.0123
ASP 3720.0128
LEU 3730.0090
LYS 3740.0122
LEU 3750.0096
TYR 3760.0117
TYR 3760.0120
SER 3770.0025
LEU 3780.0050
GLU 3790.0119
GLY 3800.0155
TYR 3810.0079
GLY 3820.0052
THR 3830.0045
ASP 3840.0096
ALA 3850.0080
VAL 3860.0104
ILE 3870.0100
TYR 3880.0107
ILE 3890.0140
LYS 3900.0159
ALA 3910.0215
LEU 3920.0232
SER 3930.0149
THR 3940.0220
ASP 3950.0231
SER 3960.0147
ILE 3970.0133
GLU 3980.0080
ARG 3990.0140
LEU 4000.0105
PRO 4010.0172
VAL 4020.0179
TYR 4030.0216
ASN 4040.0189
LYS 4050.0164
ALA 4060.0234
ALA 4070.0213
TRP 4080.0108
LYS 4090.0103
HIS 4100.0111
TYR 4110.0055
ASN 4120.0078
THR 4130.0205
ASN 4140.0115
ALA 4170.0043
ASP 4180.0007
ASP 4190.0036
TRP 4200.0040
CYS 4210.0022
VAL 4220.0061
PRO 4230.0076

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.