CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0475
GLY 410.0396
VAL 420.0173
PRO 430.0071
GLY 440.0119
GLN 450.0142
VAL 460.0095
ASP 470.0064
PHE 480.0123
TYR 490.0046
ALA 500.0050
ARG 510.0082
PHE 520.0079
SER 530.0110
PRO 540.0134
SER 550.0147
PRO 560.0148
LEU 570.0119
SER 580.0089
MET 590.0025
LYS 600.0216
GLN 610.0155
PHE 620.0066
LEU 630.0154
ASP 640.0158
PHE 650.0034
GLY 660.0094
SER 670.0230
CYS 710.0293
GLU 720.0187
LYS 730.0164
THR 740.0241
SER 750.0177
PHE 760.0102
MET 770.0118
PHE 780.0127
LEU 790.0080
ARG 800.0049
GLN 810.0032
GLU 820.0077
LEU 830.0091
PRO 840.0099
VAL 850.0083
ARG 860.0104
LEU 870.0120
ALA 880.0116
ASN 890.0099
ILE 900.0102
MET 910.0128
LYS 920.0116
GLU 930.0115
ILE 940.0114
SER 950.0103
LEU 960.0103
LEU 970.0064
PRO 980.0063
ASP 990.0246
ASN 1000.0086
LEU 1010.0037
LEU 1020.0041
ARG 1030.0226
THR 1040.0145
PRO 1050.0097
SER 1060.0067
VAL 1070.0034
GLN 1080.0042
LEU 1090.0097
VAL 1100.0060
GLN 1110.0094
SER 1120.0148
TRP 1130.0124
TYR 1140.0107
ILE 1150.0129
GLN 1160.0122
SER 1170.0134
LEU 1180.0150
GLN 1190.0161
GLU 1200.0158
LEU 1210.0191
LEU 1220.0186
ASP 1230.0258
PHE 1240.0151
LYS 1250.0143
ASP 1260.0458
LYS 1270.0120
SER 1280.0181
ALA 1290.0124
GLU 1300.0475
ASP 1310.0107
ALA 1320.0255
LYS 1330.0433
ALA 1340.0143
ILE 1350.0083
TYR 1360.0120
ASP 1370.0044
PHE 1380.0085
THR 1390.0147
ASP 1400.0189
THR 1410.0131
VAL 1420.0112
ILE 1430.0137
ARG 1440.0169
ILE 1450.0134
ARG 1460.0129
ASN 1470.0185
ARG 1480.0218
HIS 1490.0243
ASN 1500.0274
ASP 1510.0323
VAL 1520.0155
ILE 1530.0163
PRO 1540.0169
THR 1550.0114
MET 1560.0097
ALA 1570.0105
GLN 1580.0098
GLY 1590.0078
VAL 1600.0064
ILE 1610.0086
GLU 1620.0040
TYR 1630.0047
LYS 1640.0057
GLU 1650.0288
SER 1660.0308
PHE 1670.0182
ASP 1700.0195
PRO 1710.0247
VAL 1720.0166
THR 1730.0099
SER 1740.0089
GLN 1750.0110
ASN 1760.0088
VAL 1770.0083
GLN 1780.0048
TYR 1790.0074
PHE 1800.0084
LEU 1810.0056
ASP 1820.0044
ARG 1830.0034
PHE 1840.0068
TYR 1850.0056
MET 1860.0024
SER 1870.0029
ARG 1880.0052
ILE 1890.0058
SER 1900.0026
ILE 1910.0031
ARG 1920.0098
MET 1930.0079
LEU 1940.0032
LEU 1950.0052
ASN 1960.0092
GLN 1970.0060
HIS 1980.0050
SER 1990.0105
LEU 2000.0103
LEU 2010.0094
PHE 2020.0236
GLY 2030.0300
HIS 2150.0372
ILE 2160.0307
GLY 2170.0235
SER 2180.0198
ILE 2190.0130
ASN 2200.0075
PRO 2210.0210
ASN 2220.0177
CYS 2230.0155
ASN 2240.0253
VAL 2250.0192
LEU 2260.0231
GLU 2270.0313
VAL 2280.0299
ILE 2290.0233
LYS 2300.0233
ASP 2310.0260
GLY 2320.0247
TYR 2330.0122
GLU 2340.0069
ASN 2350.0119
ALA 2360.0112
ARG 2370.0106
ARG 2380.0138
LEU 2390.0103
CYS 2400.0077
ASP 2410.0087
LEU 2420.0084
TYR 2430.0193
TYR 2440.0174
ILE 2450.0205
ASN 2460.0150
SER 2470.0127
PRO 2480.0145
GLU 2490.0149
LEU 2500.0105
GLU 2510.0183
LEU 2520.0211
GLU 2530.0334
GLU 2540.0228
LEU 2550.0180
ASN 2560.0166
ALA 2570.0215
LYS 2580.0350
SER 2590.0323
PRO 2600.0181
GLY 2610.0134
GLN 2620.0122
PRO 2630.0135
ILE 2640.0060
GLN 2650.0193
VAL 2660.0114
VAL 2670.0049
TYR 2680.0071
VAL 2690.0128
PRO 2700.0237
SER 2710.0274
HIS 2720.0195
LEU 2730.0261
TYR 2740.0278
HIS 2750.0240
HIS 2750.0239
MET 2760.0161
VAL 2770.0185
PHE 2780.0195
GLU 2790.0159
LEU 2800.0082
PHE 2810.0071
LYS 2820.0082
ASN 2830.0097
ALA 2840.0085
MET 2850.0096
ARG 2860.0080
ALA 2870.0139
THR 2880.0147
MET 2890.0134
GLU 2900.0134
HIS 2910.0140
HIS 2920.0074
ALA 2930.0204
ASN 2940.0127
ARG 2950.0207
GLY 2960.0262
VAL 2970.0165
TYR 2980.0130
PRO 2990.0147
PRO 3000.0143
ILE 3010.0099
GLN 3020.0078
VAL 3030.0157
HIS 3040.0205
VAL 3050.0188
THR 3060.0186
LEU 3070.0223
GLY 3080.0201
ASN 3090.0241
GLU 3100.0131
ASP 3110.0133
LEU 3120.0146
THR 3130.0123
VAL 3140.0090
LYS 3150.0045
MET 3160.0031
SER 3170.0080
ASP 3180.0111
ARG 3190.0115
GLY 3200.0107
GLY 3210.0038
GLY 3220.0038
VAL 3230.0050
PRO 3240.0108
LEU 3250.0207
ARG 3260.0323
LYS 3270.0137
ILE 3280.0126
ASP 3290.0073
ARG 3300.0087
LEU 3310.0072
PHE 3320.0070
ASN 3330.0121
TYR 3340.0112
MET 3350.0124
TYR 3360.0172
SER 3370.0135
THR 3380.0085
ALA 3390.0102
PRO 3400.0174
ARG 3410.0152
PRO 3420.0232
ARG 3430.0388
VAL 3440.0123
GLU 3450.0113
THR 3460.0420
SER 3470.0314
ARG 3480.0448
ALA 3490.0354
VAL 3500.0433
PRO 3510.0306
LEU 3520.0125
ALA 3530.0082
GLY 3540.0084
PHE 3550.0094
GLY 3560.0160
TYR 3570.0150
GLY 3580.0172
LEU 3590.0112
PRO 3600.0105
ILE 3610.0119
SER 3620.0100
ARG 3630.0067
LEU 3640.0058
TYR 3650.0081
ALA 3660.0129
GLN 3670.0137
TYR 3680.0113
PHE 3690.0134
GLN 3700.0163
GLY 3710.0189
ASP 3720.0170
LEU 3730.0121
LYS 3740.0111
LEU 3750.0069
TYR 3760.0063
TYR 3760.0064
SER 3770.0029
LEU 3780.0075
GLU 3790.0152
GLY 3800.0105
TYR 3810.0062
GLY 3820.0077
THR 3830.0075
ASP 3840.0068
ALA 3850.0064
VAL 3860.0089
ILE 3870.0131
TYR 3880.0162
ILE 3890.0160
LYS 3900.0132
ALA 3910.0220
LEU 3920.0172
SER 3930.0092
THR 3940.0102
ASP 3950.0062
SER 3960.0084
ILE 3970.0095
GLU 3980.0120
ARG 3990.0125
LEU 4000.0103
PRO 4010.0051
VAL 4020.0089
TYR 4030.0093
ASN 4040.0076
LYS 4050.0120
ALA 4060.0145
ALA 4070.0094
TRP 4080.0061
LYS 4090.0123
HIS 4100.0144
TYR 4110.0104
ASN 4120.0112
THR 4130.0187
ASN 4140.0202
ALA 4170.0025
ASP 4180.0011
ASP 4190.0011
TRP 4200.0005
CYS 4210.0007
VAL 4220.0006
PRO 4230.0007

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.