CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0586
GLY 410.0550
VAL 420.0213
PRO 430.0237
GLY 440.0121
GLN 450.0096
VAL 460.0095
ASP 470.0156
PHE 480.0164
TYR 490.0114
ALA 500.0151
ARG 510.0276
PHE 520.0265
SER 530.0176
PRO 540.0190
SER 550.0259
PRO 560.0271
LEU 570.0226
SER 580.0197
MET 590.0159
LYS 600.0149
GLN 610.0226
PHE 620.0211
LEU 630.0218
ASP 640.0308
PHE 650.0291
GLY 660.0238
SER 670.0341
CYS 710.0216
GLU 720.0092
LYS 730.0173
THR 740.0213
SER 750.0176
PHE 760.0127
MET 770.0142
PHE 780.0142
LEU 790.0086
ARG 800.0091
GLN 810.0151
GLU 820.0157
LEU 830.0111
PRO 840.0146
VAL 850.0146
ARG 860.0126
LEU 870.0124
ALA 880.0089
ASN 890.0085
ILE 900.0061
MET 910.0052
LYS 920.0080
GLU 930.0074
ILE 940.0068
SER 950.0115
LEU 960.0103
LEU 970.0093
PRO 980.0103
ASP 990.0136
ASN 1000.0183
LEU 1010.0175
LEU 1020.0128
ARG 1030.0075
THR 1040.0088
PRO 1050.0103
SER 1060.0148
VAL 1070.0132
GLN 1080.0116
LEU 1090.0161
VAL 1100.0160
GLN 1110.0118
SER 1120.0169
TRP 1130.0165
TYR 1140.0157
ILE 1150.0192
GLN 1160.0199
SER 1170.0215
LEU 1180.0165
GLN 1190.0210
GLU 1200.0162
LEU 1210.0130
LEU 1220.0136
ASP 1230.0136
PHE 1240.0104
LYS 1250.0111
ASP 1260.0130
LYS 1270.0130
SER 1280.0144
ALA 1290.0146
GLU 1300.0174
ASP 1310.0156
ALA 1320.0104
LYS 1330.0153
ALA 1340.0122
ILE 1350.0063
TYR 1360.0107
ASP 1370.0065
PHE 1380.0072
THR 1390.0140
ASP 1400.0159
THR 1410.0092
VAL 1420.0138
ILE 1430.0235
ARG 1440.0175
ILE 1450.0141
ARG 1460.0219
ASN 1470.0224
ARG 1480.0096
HIS 1490.0133
ASN 1500.0152
ASP 1510.0167
VAL 1520.0129
ILE 1530.0096
PRO 1540.0099
THR 1550.0100
MET 1560.0096
ALA 1570.0090
GLN 1580.0122
GLY 1590.0153
VAL 1600.0163
ILE 1610.0145
GLU 1620.0134
TYR 1630.0230
LYS 1640.0192
GLU 1650.0339
SER 1660.0337
PHE 1670.0336
ASP 1700.0388
PRO 1710.0173
VAL 1720.0113
THR 1730.0105
SER 1740.0176
GLN 1750.0173
ASN 1760.0128
VAL 1770.0158
GLN 1780.0134
TYR 1790.0157
PHE 1800.0083
LEU 1810.0067
ASP 1820.0042
ARG 1830.0080
PHE 1840.0055
TYR 1850.0053
MET 1860.0039
SER 1870.0068
ARG 1880.0092
ILE 1890.0095
SER 1900.0063
ILE 1910.0072
ARG 1920.0122
MET 1930.0093
LEU 1940.0086
LEU 1950.0110
ASN 1960.0224
GLN 1970.0199
HIS 1980.0204
SER 1990.0260
LEU 2000.0308
LEU 2010.0212
PHE 2020.0223
GLY 2030.0390
HIS 2150.0150
ILE 2160.0158
GLY 2170.0269
SER 2180.0235
ILE 2190.0145
ASN 2200.0129
PRO 2210.0150
ASN 2220.0109
CYS 2230.0085
ASN 2240.0059
VAL 2250.0105
LEU 2260.0125
GLU 2270.0106
VAL 2280.0132
ILE 2290.0139
LYS 2300.0152
ASP 2310.0172
GLY 2320.0157
TYR 2330.0117
GLU 2340.0141
ASN 2350.0121
ALA 2360.0098
ARG 2370.0062
ARG 2380.0058
LEU 2390.0071
CYS 2400.0076
ASP 2410.0081
LEU 2420.0077
TYR 2430.0123
TYR 2440.0079
ILE 2450.0134
ASN 2460.0096
SER 2470.0070
PRO 2480.0088
GLU 2490.0062
LEU 2500.0075
GLU 2510.0091
LEU 2520.0080
GLU 2530.0164
GLU 2540.0182
LEU 2550.0164
ASN 2560.0121
ALA 2570.0119
LYS 2580.0068
SER 2590.0266
PRO 2600.0237
GLY 2610.0176
GLN 2620.0196
PRO 2630.0218
ILE 2640.0129
GLN 2650.0050
VAL 2660.0089
VAL 2670.0108
TYR 2680.0085
VAL 2690.0125
PRO 2700.0138
SER 2710.0160
HIS 2720.0135
LEU 2730.0145
TYR 2740.0159
HIS 2750.0157
HIS 2750.0157
MET 2760.0129
VAL 2770.0137
PHE 2780.0141
GLU 2790.0122
LEU 2800.0109
PHE 2810.0075
LYS 2820.0069
ASN 2830.0043
ALA 2840.0048
MET 2850.0056
ARG 2860.0093
ALA 2870.0158
THR 2880.0175
MET 2890.0181
GLU 2900.0190
HIS 2910.0246
HIS 2920.0260
ALA 2930.0153
ASN 2940.0234
ARG 2950.0323
GLY 2960.0268
VAL 2970.0281
TYR 2980.0273
PRO 2990.0161
PRO 3000.0125
ILE 3010.0097
GLN 3020.0094
VAL 3030.0060
HIS 3040.0096
VAL 3050.0113
THR 3060.0152
LEU 3070.0144
GLY 3080.0134
ASN 3090.0160
GLU 3100.0158
ASP 3110.0131
LEU 3120.0103
THR 3130.0058
VAL 3140.0039
LYS 3150.0110
MET 3160.0131
SER 3170.0137
ASP 3180.0112
ARG 3190.0066
GLY 3200.0208
GLY 3210.0110
GLY 3220.0093
VAL 3230.0107
PRO 3240.0036
LEU 3250.0103
ARG 3260.0324
LYS 3270.0175
ILE 3280.0262
ASP 3290.0224
ARG 3300.0195
LEU 3310.0146
PHE 3320.0102
ASN 3330.0033
TYR 3340.0072
MET 3350.0170
TYR 3360.0209
SER 3370.0130
THR 3380.0099
ALA 3390.0262
PRO 3400.0315
ARG 3410.0232
PRO 3420.0344
ARG 3430.0432
VAL 3440.0295
GLU 3450.0118
THR 3460.0402
SER 3470.0118
ARG 3480.0182
ALA 3490.0118
VAL 3500.0175
PRO 3510.0155
LEU 3520.0101
ALA 3530.0127
GLY 3540.0293
PHE 3550.0225
GLY 3560.0186
TYR 3570.0085
GLY 3580.0150
LEU 3590.0075
PRO 3600.0081
ILE 3610.0093
SER 3620.0090
ARG 3630.0067
LEU 3640.0071
TYR 3650.0087
ALA 3660.0076
GLN 3670.0099
TYR 3680.0087
PHE 3690.0139
GLN 3700.0164
GLY 3710.0131
ASP 3720.0129
LEU 3730.0112
LYS 3740.0110
LEU 3750.0107
TYR 3760.0115
TYR 3760.0118
SER 3770.0167
LEU 3780.0172
GLU 3790.0162
GLY 3800.0207
TYR 3810.0140
GLY 3820.0090
THR 3830.0174
ASP 3840.0196
ALA 3850.0153
VAL 3860.0142
ILE 3870.0108
TYR 3880.0120
ILE 3890.0110
LYS 3900.0137
ALA 3910.0112
LEU 3920.0089
SER 3930.0071
THR 3940.0086
ASP 3950.0128
SER 3960.0152
ILE 3970.0174
GLU 3980.0180
ARG 3990.0147
LEU 4000.0159
PRO 4010.0025
VAL 4020.0071
TYR 4030.0167
ASN 4040.0158
LYS 4050.0255
ALA 4060.0269
ALA 4070.0236
TRP 4080.0206
LYS 4090.0279
HIS 4100.0249
TYR 4110.0164
ASN 4120.0172
THR 4130.0324
ASN 4140.0286
ALA 4170.0345
ASP 4180.0078
ASP 4190.0363
TRP 4200.0393
CYS 4210.0140
VAL 4220.0445
PRO 4230.0586

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.