CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0548
GLY 410.0438
VAL 420.0290
PRO 430.0477
GLY 440.0185
GLN 450.0107
VAL 460.0116
ASP 470.0104
PHE 480.0063
TYR 490.0073
ALA 500.0100
ARG 510.0126
PHE 520.0130
SER 530.0072
PRO 540.0114
SER 550.0200
PRO 560.0227
LEU 570.0268
SER 580.0228
MET 590.0079
LYS 600.0313
GLN 610.0167
PHE 620.0063
LEU 630.0156
ASP 640.0129
PHE 650.0130
GLY 660.0201
SER 670.0461
CYS 710.0152
GLU 720.0096
LYS 730.0094
THR 740.0107
SER 750.0118
PHE 760.0123
MET 770.0157
PHE 780.0137
LEU 790.0148
ARG 800.0121
GLN 810.0128
GLU 820.0134
LEU 830.0057
PRO 840.0046
VAL 850.0071
ARG 860.0081
LEU 870.0037
ALA 880.0058
ASN 890.0053
ILE 900.0070
MET 910.0103
LYS 920.0112
GLU 930.0109
ILE 940.0112
SER 950.0097
LEU 960.0095
LEU 970.0040
PRO 980.0038
ASP 990.0213
ASN 1000.0098
LEU 1010.0047
LEU 1020.0056
ARG 1030.0174
THR 1040.0120
PRO 1050.0122
SER 1060.0088
VAL 1070.0072
GLN 1080.0079
LEU 1090.0041
VAL 1100.0069
GLN 1110.0109
SER 1120.0102
TRP 1130.0080
TYR 1140.0101
ILE 1150.0134
GLN 1160.0124
SER 1170.0098
LEU 1180.0063
GLN 1190.0092
GLU 1200.0095
LEU 1210.0036
LEU 1220.0052
ASP 1230.0089
PHE 1240.0101
LYS 1250.0241
ASP 1260.0490
LYS 1270.0111
SER 1280.0104
ALA 1290.0127
GLU 1300.0137
ASP 1310.0144
ALA 1320.0096
LYS 1330.0158
ALA 1340.0173
ILE 1350.0106
TYR 1360.0156
ASP 1370.0149
PHE 1380.0134
THR 1390.0154
ASP 1400.0190
THR 1410.0151
VAL 1420.0134
ILE 1430.0128
ARG 1440.0134
ILE 1450.0099
ARG 1460.0059
ASN 1470.0030
ARG 1480.0025
HIS 1490.0043
ASN 1500.0078
ASP 1510.0075
VAL 1520.0038
ILE 1530.0044
PRO 1540.0073
THR 1550.0034
MET 1560.0045
ALA 1570.0054
GLN 1580.0064
GLY 1590.0097
VAL 1600.0087
ILE 1610.0106
GLU 1620.0089
TYR 1630.0065
LYS 1640.0056
GLU 1650.0147
SER 1660.0208
PHE 1670.0153
ASP 1700.0069
PRO 1710.0052
VAL 1720.0080
THR 1730.0075
SER 1740.0061
GLN 1750.0090
ASN 1760.0077
VAL 1770.0056
GLN 1780.0076
TYR 1790.0112
PHE 1800.0097
LEU 1810.0073
ASP 1820.0065
ARG 1830.0077
PHE 1840.0061
TYR 1850.0039
MET 1860.0077
SER 1870.0079
ARG 1880.0062
ILE 1890.0063
SER 1900.0107
ILE 1910.0102
ARG 1920.0077
MET 1930.0068
LEU 1940.0015
LEU 1950.0043
ASN 1960.0067
GLN 1970.0097
HIS 1980.0099
SER 1990.0087
LEU 2000.0068
LEU 2010.0107
PHE 2020.0103
GLY 2030.0105
HIS 2150.0246
ILE 2160.0200
GLY 2170.0117
SER 2180.0105
ILE 2190.0135
ASN 2200.0197
PRO 2210.0382
ASN 2220.0466
CYS 2230.0204
ASN 2240.0255
VAL 2250.0126
LEU 2260.0158
GLU 2270.0241
VAL 2280.0144
ILE 2290.0086
LYS 2300.0154
ASP 2310.0174
GLY 2320.0129
TYR 2330.0107
GLU 2340.0165
ASN 2350.0190
ALA 2360.0107
ARG 2370.0076
ARG 2380.0108
LEU 2390.0015
CYS 2400.0035
ASP 2410.0059
LEU 2420.0086
TYR 2430.0079
TYR 2440.0082
ILE 2450.0119
ASN 2460.0111
SER 2470.0066
PRO 2480.0064
GLU 2490.0074
LEU 2500.0044
GLU 2510.0099
LEU 2520.0068
GLU 2530.0077
GLU 2540.0037
LEU 2550.0076
ASN 2560.0019
ALA 2570.0138
LYS 2580.0275
SER 2590.0300
PRO 2600.0368
GLY 2610.0290
GLN 2620.0189
PRO 2630.0257
ILE 2640.0131
GLN 2650.0190
VAL 2660.0268
VAL 2670.0179
TYR 2680.0171
VAL 2690.0121
PRO 2700.0101
SER 2710.0079
HIS 2720.0084
LEU 2730.0068
TYR 2740.0070
HIS 2750.0052
HIS 2750.0052
MET 2760.0054
VAL 2770.0042
PHE 2780.0084
GLU 2790.0044
LEU 2800.0028
PHE 2810.0036
LYS 2820.0051
ASN 2830.0036
ALA 2840.0047
MET 2850.0051
ARG 2860.0050
ALA 2870.0078
THR 2880.0069
MET 2890.0090
GLU 2900.0089
HIS 2910.0061
HIS 2920.0044
ALA 2930.0095
ASN 2940.0085
ARG 2950.0055
GLY 2960.0089
VAL 2970.0036
TYR 2980.0058
PRO 2990.0059
PRO 3000.0076
ILE 3010.0075
GLN 3020.0124
VAL 3030.0075
HIS 3040.0037
VAL 3050.0058
THR 3060.0097
LEU 3070.0194
GLY 3080.0148
ASN 3090.0278
GLU 3100.0222
ASP 3110.0213
LEU 3120.0219
THR 3130.0154
VAL 3140.0128
LYS 3150.0084
MET 3160.0095
SER 3170.0138
ASP 3180.0139
ARG 3190.0136
GLY 3200.0088
GLY 3210.0176
GLY 3220.0154
VAL 3230.0188
PRO 3240.0181
LEU 3250.0197
ARG 3260.0211
LYS 3270.0126
ILE 3280.0172
ASP 3290.0080
ARG 3300.0221
LEU 3310.0095
PHE 3320.0023
ASN 3330.0053
TYR 3340.0019
MET 3350.0114
TYR 3360.0170
SER 3370.0030
THR 3380.0085
ALA 3390.0289
PRO 3400.0402
ARG 3410.0380
PRO 3420.0455
ARG 3430.0548
VAL 3440.0357
GLU 3450.0213
THR 3460.0361
SER 3470.0369
ARG 3480.0190
ALA 3490.0154
VAL 3500.0207
PRO 3510.0214
LEU 3520.0097
ALA 3530.0163
GLY 3540.0332
PHE 3550.0263
GLY 3560.0215
TYR 3570.0039
GLY 3580.0080
LEU 3590.0014
PRO 3600.0019
ILE 3610.0039
SER 3620.0033
ARG 3630.0075
LEU 3640.0038
TYR 3650.0064
ALA 3660.0091
GLN 3670.0081
TYR 3680.0076
PHE 3690.0089
GLN 3700.0135
GLY 3710.0111
ASP 3720.0146
LEU 3730.0157
LYS 3740.0178
LEU 3750.0200
TYR 3760.0186
TYR 3760.0188
SER 3770.0162
LEU 3780.0083
GLU 3790.0264
GLY 3800.0415
TYR 3810.0212
GLY 3820.0151
THR 3830.0108
ASP 3840.0163
ALA 3850.0164
VAL 3860.0161
ILE 3870.0171
TYR 3880.0149
ILE 3890.0194
LYS 3900.0200
ALA 3910.0349
LEU 3920.0399
SER 3930.0341
THR 3940.0470
ASP 3950.0370
SER 3960.0199
ILE 3970.0237
GLU 3980.0201
ARG 3990.0184
LEU 4000.0185
PRO 4010.0057
VAL 4020.0049
TYR 4030.0123
ASN 4040.0137
LYS 4050.0043
ALA 4060.0126
ALA 4070.0129
TRP 4080.0070
LYS 4090.0080
HIS 4100.0110
TYR 4110.0066
ASN 4120.0062
THR 4130.0179
ASN 4140.0122
ALA 4170.0019
ASP 4180.0004
ASP 4190.0054
TRP 4200.0064
CYS 4210.0029
VAL 4220.0065
PRO 4230.0087

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.