CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0829
GLY 410.0298
VAL 420.0213
PRO 430.0365
GLY 440.0215
GLN 450.0099
VAL 460.0070
ASP 470.0104
PHE 480.0164
TYR 490.0088
ALA 500.0118
ARG 510.0212
PHE 520.0130
SER 530.0173
PRO 540.0120
SER 550.0188
PRO 560.0161
LEU 570.0125
SER 580.0109
MET 590.0142
LYS 600.0264
GLN 610.0252
PHE 620.0216
LEU 630.0230
ASP 640.0327
PHE 650.0169
GLY 660.0212
SER 670.0103
CYS 710.0265
GLU 720.0169
LYS 730.0210
THR 740.0239
SER 750.0203
PHE 760.0185
MET 770.0212
PHE 780.0236
LEU 790.0256
ARG 800.0160
GLN 810.0193
GLU 820.0175
LEU 830.0203
PRO 840.0151
VAL 850.0071
ARG 860.0050
LEU 870.0120
ALA 880.0092
ASN 890.0098
ILE 900.0106
MET 910.0064
LYS 920.0058
GLU 930.0074
ILE 940.0089
SER 950.0107
LEU 960.0109
LEU 970.0163
PRO 980.0235
ASP 990.0259
ASN 1000.0326
LEU 1010.0209
LEU 1020.0210
ARG 1030.0273
THR 1040.0187
PRO 1050.0154
SER 1060.0067
VAL 1070.0119
GLN 1080.0141
LEU 1090.0129
VAL 1100.0098
GLN 1110.0070
SER 1120.0048
TRP 1130.0052
TYR 1140.0089
ILE 1150.0132
GLN 1160.0157
SER 1170.0232
LEU 1180.0210
GLN 1190.0267
GLU 1200.0286
LEU 1210.0223
LEU 1220.0146
ASP 1230.0203
PHE 1240.0034
LYS 1250.0234
ASP 1260.0829
LYS 1270.0168
SER 1280.0180
ALA 1290.0154
GLU 1300.0216
ASP 1310.0339
ALA 1320.0216
LYS 1330.0177
ALA 1340.0245
ILE 1350.0093
TYR 1360.0211
ASP 1370.0181
PHE 1380.0162
THR 1390.0097
ASP 1400.0198
THR 1410.0214
VAL 1420.0205
ILE 1430.0161
ARG 1440.0213
ILE 1450.0194
ARG 1460.0159
ASN 1470.0070
ARG 1480.0066
HIS 1490.0183
ASN 1500.0286
ASP 1510.0296
VAL 1520.0229
ILE 1530.0203
PRO 1540.0177
THR 1550.0127
MET 1560.0143
ALA 1570.0168
GLN 1580.0115
GLY 1590.0218
VAL 1600.0258
ILE 1610.0316
GLU 1620.0314
TYR 1630.0341
LYS 1640.0291
GLU 1650.0326
SER 1660.0739
PHE 1670.0237
ASP 1700.0303
PRO 1710.0079
VAL 1720.0226
THR 1730.0120
SER 1740.0050
GLN 1750.0143
ASN 1760.0061
VAL 1770.0047
GLN 1780.0044
TYR 1790.0054
PHE 1800.0072
LEU 1810.0055
ASP 1820.0087
ARG 1830.0111
PHE 1840.0125
TYR 1850.0095
MET 1860.0111
SER 1870.0117
ARG 1880.0160
ILE 1890.0110
SER 1900.0087
ILE 1910.0051
ARG 1920.0104
MET 1930.0071
LEU 1940.0074
LEU 1950.0086
ASN 1960.0069
GLN 1970.0054
HIS 1980.0086
SER 1990.0099
LEU 2000.0103
LEU 2010.0108
PHE 2020.0124
GLY 2030.0187
HIS 2150.0089
ILE 2160.0070
GLY 2170.0076
SER 2180.0066
ILE 2190.0058
ASN 2200.0074
PRO 2210.0107
ASN 2220.0104
CYS 2230.0076
ASN 2240.0060
VAL 2250.0035
LEU 2260.0075
GLU 2270.0183
VAL 2280.0142
ILE 2290.0121
LYS 2300.0175
ASP 2310.0200
GLY 2320.0131
TYR 2330.0099
GLU 2340.0067
ASN 2350.0073
ALA 2360.0034
ARG 2370.0049
ARG 2380.0116
LEU 2390.0109
CYS 2400.0072
ASP 2410.0094
LEU 2420.0093
TYR 2430.0091
TYR 2440.0054
ILE 2450.0185
ASN 2460.0064
SER 2470.0049
PRO 2480.0037
GLU 2490.0095
LEU 2500.0126
GLU 2510.0137
LEU 2520.0112
GLU 2530.0098
GLU 2540.0082
LEU 2550.0184
ASN 2560.0136
ALA 2570.0135
LYS 2580.0127
SER 2590.0199
PRO 2600.0360
GLY 2610.0330
GLN 2620.0135
PRO 2630.0267
ILE 2640.0172
GLN 2650.0110
VAL 2660.0098
VAL 2670.0046
TYR 2680.0048
VAL 2690.0065
PRO 2700.0069
SER 2710.0087
HIS 2720.0063
LEU 2730.0082
TYR 2740.0112
HIS 2750.0074
HIS 2750.0073
MET 2760.0049
VAL 2770.0079
PHE 2780.0074
GLU 2790.0032
LEU 2800.0027
PHE 2810.0044
LYS 2820.0017
ASN 2830.0017
ALA 2840.0021
MET 2850.0015
ARG 2860.0025
ALA 2870.0037
THR 2880.0036
MET 2890.0035
GLU 2900.0036
HIS 2910.0062
HIS 2920.0059
ALA 2930.0094
ASN 2940.0091
ARG 2950.0081
GLY 2960.0114
VAL 2970.0065
TYR 2980.0056
PRO 2990.0036
PRO 3000.0075
ILE 3010.0093
GLN 3020.0129
VAL 3030.0099
HIS 3040.0051
VAL 3050.0055
THR 3060.0104
LEU 3070.0132
GLY 3080.0124
ASN 3090.0265
GLU 3100.0045
ASP 3110.0046
LEU 3120.0061
THR 3130.0048
VAL 3140.0026
LYS 3150.0066
MET 3160.0082
SER 3170.0112
ASP 3180.0087
ARG 3190.0071
GLY 3200.0066
GLY 3210.0065
GLY 3220.0084
VAL 3230.0059
PRO 3240.0042
LEU 3250.0103
ARG 3260.0120
LYS 3270.0059
ILE 3280.0097
ASP 3290.0045
ARG 3300.0087
LEU 3310.0037
PHE 3320.0031
ASN 3330.0054
TYR 3340.0042
MET 3350.0110
TYR 3360.0058
SER 3370.0103
THR 3380.0122
ALA 3390.0259
PRO 3400.0324
ARG 3410.0222
PRO 3420.0225
ARG 3430.0332
VAL 3440.0292
GLU 3450.0292
THR 3460.0377
SER 3470.0515
ARG 3480.0401
ALA 3490.0244
VAL 3500.0307
PRO 3510.0133
LEU 3520.0134
ALA 3530.0151
GLY 3540.0179
PHE 3550.0135
GLY 3560.0092
TYR 3570.0061
GLY 3580.0078
LEU 3590.0039
PRO 3600.0036
ILE 3610.0022
SER 3620.0037
ARG 3630.0045
LEU 3640.0026
TYR 3650.0032
ALA 3660.0021
GLN 3670.0043
TYR 3680.0051
PHE 3690.0039
GLN 3700.0064
GLY 3710.0051
ASP 3720.0049
LEU 3730.0043
LYS 3740.0048
LEU 3750.0068
TYR 3760.0081
TYR 3760.0079
SER 3770.0098
LEU 3780.0099
GLU 3790.0060
GLY 3800.0042
TYR 3810.0087
GLY 3820.0098
THR 3830.0095
ASP 3840.0096
ALA 3850.0075
VAL 3860.0046
ILE 3870.0028
TYR 3880.0043
ILE 3890.0051
LYS 3900.0098
ALA 3910.0088
LEU 3920.0139
SER 3930.0165
THR 3940.0183
ASP 3950.0173
SER 3960.0085
ILE 3970.0066
GLU 3980.0084
ARG 3990.0118
LEU 4000.0156
PRO 4010.0164
VAL 4020.0154
TYR 4030.0131
ASN 4040.0117
LYS 4050.0122
ALA 4060.0107
ALA 4070.0110
TRP 4080.0086
LYS 4090.0061
HIS 4100.0067
TYR 4110.0042
ASN 4120.0069
THR 4130.0109
ASN 4140.0125
ALA 4170.0015
ASP 4180.0005
ASP 4190.0027
TRP 4200.0036
CYS 4210.0023
VAL 4220.0033
PRO 4230.0042

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.