CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0536
GLY 410.0536
VAL 420.0239
PRO 430.0164
GLY 440.0186
GLN 450.0118
VAL 460.0096
ASP 470.0094
PHE 480.0135
TYR 490.0049
ALA 500.0045
ARG 510.0148
PHE 520.0094
SER 530.0130
PRO 540.0171
SER 550.0200
PRO 560.0209
LEU 570.0160
SER 580.0155
MET 590.0099
LYS 600.0138
GLN 610.0123
PHE 620.0112
LEU 630.0165
ASP 640.0200
PHE 650.0118
GLY 660.0161
SER 670.0182
CYS 710.0088
GLU 720.0086
LYS 730.0124
THR 740.0081
SER 750.0043
PHE 760.0068
MET 770.0090
PHE 780.0118
LEU 790.0085
ARG 800.0083
GLN 810.0064
GLU 820.0108
LEU 830.0072
PRO 840.0070
VAL 850.0075
ARG 860.0108
LEU 870.0084
ALA 880.0082
ASN 890.0053
ILE 900.0070
MET 910.0101
LYS 920.0069
GLU 930.0031
ILE 940.0060
SER 950.0062
LEU 960.0026
LEU 970.0057
PRO 980.0104
ASP 990.0178
ASN 1000.0192
LEU 1010.0141
LEU 1020.0111
ARG 1030.0156
THR 1040.0159
PRO 1050.0164
SER 1060.0151
VAL 1070.0170
GLN 1080.0191
LEU 1090.0315
VAL 1100.0234
GLN 1110.0279
SER 1120.0309
TRP 1130.0215
TYR 1140.0185
ILE 1150.0242
GLN 1160.0195
SER 1170.0149
LEU 1180.0177
GLN 1190.0238
GLU 1200.0151
LEU 1210.0130
LEU 1220.0158
ASP 1230.0167
PHE 1240.0141
LYS 1250.0160
ASP 1260.0156
LYS 1270.0150
SER 1280.0122
ALA 1290.0124
GLU 1300.0216
ASP 1310.0162
ALA 1320.0139
LYS 1330.0090
ALA 1340.0063
ILE 1350.0073
TYR 1360.0222
ASP 1370.0124
PHE 1380.0095
THR 1390.0073
ASP 1400.0143
THR 1410.0146
VAL 1420.0113
ILE 1430.0229
ARG 1440.0311
ILE 1450.0261
ARG 1460.0282
ASN 1470.0459
ARG 1480.0412
HIS 1490.0307
ASN 1500.0388
ASP 1510.0369
VAL 1520.0260
ILE 1530.0181
PRO 1540.0175
THR 1550.0143
MET 1560.0093
ALA 1570.0082
GLN 1580.0062
GLY 1590.0046
VAL 1600.0075
ILE 1610.0085
GLU 1620.0109
TYR 1630.0170
LYS 1640.0138
GLU 1650.0164
SER 1660.0174
PHE 1670.0270
ASP 1700.0259
PRO 1710.0162
VAL 1720.0137
THR 1730.0168
SER 1740.0151
GLN 1750.0123
ASN 1760.0079
VAL 1770.0079
GLN 1780.0083
TYR 1790.0078
PHE 1800.0038
LEU 1810.0041
ASP 1820.0046
ARG 1830.0053
PHE 1840.0069
TYR 1850.0084
MET 1860.0103
SER 1870.0098
ARG 1880.0082
ILE 1890.0084
SER 1900.0096
ILE 1910.0083
ARG 1920.0163
MET 1930.0089
LEU 1940.0071
LEU 1950.0104
ASN 1960.0113
GLN 1970.0093
HIS 1980.0061
SER 1990.0079
LEU 2000.0158
LEU 2010.0160
PHE 2020.0119
GLY 2030.0123
HIS 2150.0379
ILE 2160.0231
GLY 2170.0181
SER 2180.0179
ILE 2190.0204
ASN 2200.0293
PRO 2210.0490
ASN 2220.0507
CYS 2230.0158
ASN 2240.0013
VAL 2250.0164
LEU 2260.0182
GLU 2270.0186
VAL 2280.0159
ILE 2290.0166
LYS 2300.0165
ASP 2310.0192
GLY 2320.0154
TYR 2330.0109
GLU 2340.0148
ASN 2350.0151
ALA 2360.0103
ARG 2370.0083
ARG 2380.0102
LEU 2390.0123
CYS 2400.0086
ASP 2410.0186
LEU 2420.0174
TYR 2430.0128
TYR 2440.0163
ILE 2450.0389
ASN 2460.0177
SER 2470.0087
PRO 2480.0086
GLU 2490.0092
LEU 2500.0083
GLU 2510.0217
LEU 2520.0134
GLU 2530.0223
GLU 2540.0090
LEU 2550.0090
ASN 2560.0108
ALA 2570.0087
LYS 2580.0059
SER 2590.0112
PRO 2600.0122
GLY 2610.0207
GLN 2620.0199
PRO 2630.0159
ILE 2640.0165
GLN 2650.0130
VAL 2660.0230
VAL 2670.0254
TYR 2680.0188
VAL 2690.0175
PRO 2700.0134
SER 2710.0137
HIS 2720.0148
LEU 2730.0176
TYR 2740.0175
HIS 2750.0160
HIS 2750.0160
MET 2760.0141
VAL 2770.0141
PHE 2780.0147
GLU 2790.0119
LEU 2800.0083
PHE 2810.0081
LYS 2820.0100
ASN 2830.0100
ALA 2840.0101
MET 2850.0060
ARG 2860.0049
ALA 2870.0109
THR 2880.0121
MET 2890.0158
GLU 2900.0162
HIS 2910.0198
HIS 2920.0180
ALA 2930.0205
ASN 2940.0310
ARG 2950.0209
GLY 2960.0141
VAL 2970.0111
TYR 2980.0128
PRO 2990.0083
PRO 3000.0131
ILE 3010.0117
GLN 3020.0157
VAL 3030.0117
HIS 3040.0193
VAL 3050.0153
THR 3060.0202
LEU 3070.0161
GLY 3080.0130
ASN 3090.0286
GLU 3100.0105
ASP 3110.0141
LEU 3120.0126
THR 3130.0179
VAL 3140.0127
LYS 3150.0107
MET 3160.0089
SER 3170.0193
ASP 3180.0197
ARG 3190.0173
GLY 3200.0147
GLY 3210.0056
GLY 3220.0158
VAL 3230.0087
PRO 3240.0041
LEU 3250.0101
ARG 3260.0097
LYS 3270.0102
ILE 3280.0112
ASP 3290.0118
ARG 3300.0095
LEU 3310.0069
PHE 3320.0060
ASN 3330.0065
TYR 3340.0063
MET 3350.0125
TYR 3360.0147
SER 3370.0074
THR 3380.0082
ALA 3390.0264
PRO 3400.0455
ARG 3410.0349
PRO 3420.0403
ARG 3430.0201
VAL 3440.0176
GLU 3450.0227
THR 3460.0207
SER 3470.0317
ARG 3480.0188
ALA 3490.0212
VAL 3500.0205
PRO 3510.0169
LEU 3520.0130
ALA 3530.0117
GLY 3540.0098
PHE 3550.0159
GLY 3560.0108
TYR 3570.0041
GLY 3580.0065
LEU 3590.0062
PRO 3600.0058
ILE 3610.0053
SER 3620.0073
ARG 3630.0071
LEU 3640.0054
TYR 3650.0069
ALA 3660.0062
GLN 3670.0056
TYR 3680.0070
PHE 3690.0096
GLN 3700.0146
GLY 3710.0040
ASP 3720.0076
LEU 3730.0074
LYS 3740.0056
LEU 3750.0103
TYR 3760.0097
TYR 3760.0100
SER 3770.0215
LEU 3780.0203
GLU 3790.0142
GLY 3800.0214
TYR 3810.0250
GLY 3820.0261
THR 3830.0254
ASP 3840.0217
ALA 3850.0102
VAL 3860.0050
ILE 3870.0082
TYR 3880.0099
ILE 3890.0081
LYS 3900.0122
ALA 3910.0097
LEU 3920.0199
SER 3930.0159
THR 3940.0310
ASP 3950.0299
SER 3960.0185
ILE 3970.0174
GLU 3980.0167
ARG 3990.0182
LEU 4000.0177
PRO 4010.0121
VAL 4020.0079
TYR 4030.0071
ASN 4040.0087
LYS 4050.0081
ALA 4060.0021
ALA 4070.0041
TRP 4080.0032
LYS 4090.0024
HIS 4100.0043
TYR 4110.0026
ASN 4120.0015
THR 4130.0065
ASN 4140.0087
ALA 4170.0031
ASP 4180.0007
ASP 4190.0013
TRP 4200.0015
CYS 4210.0016
VAL 4220.0012
PRO 4230.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.