CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0527
GLY 410.0334
VAL 420.0194
PRO 430.0280
GLY 440.0149
GLN 450.0102
VAL 460.0095
ASP 470.0065
PHE 480.0092
TYR 490.0078
ALA 500.0069
ARG 510.0120
PHE 520.0108
SER 530.0094
PRO 540.0081
SER 550.0076
PRO 560.0074
LEU 570.0095
SER 580.0086
MET 590.0136
LYS 600.0156
GLN 610.0132
PHE 620.0099
LEU 630.0082
ASP 640.0087
PHE 650.0068
GLY 660.0089
SER 670.0387
CYS 710.0148
GLU 720.0129
LYS 730.0123
THR 740.0093
SER 750.0070
PHE 760.0055
MET 770.0028
PHE 780.0040
LEU 790.0054
ARG 800.0054
GLN 810.0072
GLU 820.0065
LEU 830.0065
PRO 840.0065
VAL 850.0059
ARG 860.0048
LEU 870.0052
ALA 880.0047
ASN 890.0031
ILE 900.0040
MET 910.0085
LYS 920.0076
GLU 930.0116
ILE 940.0111
SER 950.0110
LEU 960.0104
LEU 970.0122
PRO 980.0122
ASP 990.0218
ASN 1000.0040
LEU 1010.0072
LEU 1020.0102
ARG 1030.0200
THR 1040.0272
PRO 1050.0210
SER 1060.0182
VAL 1070.0210
GLN 1080.0268
LEU 1090.0218
VAL 1100.0188
GLN 1110.0229
SER 1120.0238
TRP 1130.0151
TYR 1140.0176
ILE 1150.0174
GLN 1160.0144
SER 1170.0117
LEU 1180.0086
GLN 1190.0109
GLU 1200.0110
LEU 1210.0103
LEU 1220.0102
ASP 1230.0136
PHE 1240.0105
LYS 1250.0113
ASP 1260.0527
LYS 1270.0176
SER 1280.0196
ALA 1290.0142
GLU 1300.0257
ASP 1310.0131
ALA 1320.0135
LYS 1330.0142
ALA 1340.0061
ILE 1350.0070
TYR 1360.0037
ASP 1370.0057
PHE 1380.0063
THR 1390.0086
ASP 1400.0089
THR 1410.0110
VAL 1420.0110
ILE 1430.0148
ARG 1440.0181
ILE 1450.0163
ARG 1460.0162
ASN 1470.0221
ARG 1480.0213
HIS 1490.0220
ASN 1500.0303
ASP 1510.0244
VAL 1520.0175
ILE 1530.0197
PRO 1540.0182
THR 1550.0070
MET 1560.0074
ALA 1570.0111
GLN 1580.0076
GLY 1590.0042
VAL 1600.0042
ILE 1610.0039
GLU 1620.0063
TYR 1630.0061
LYS 1640.0059
GLU 1650.0113
SER 1660.0159
PHE 1670.0084
ASP 1700.0157
PRO 1710.0188
VAL 1720.0188
THR 1730.0113
SER 1740.0108
GLN 1750.0179
ASN 1760.0118
VAL 1770.0085
GLN 1780.0045
TYR 1790.0054
PHE 1800.0064
LEU 1810.0040
ASP 1820.0106
ARG 1830.0040
PHE 1840.0081
TYR 1850.0104
MET 1860.0118
SER 1870.0096
ARG 1880.0137
ILE 1890.0097
SER 1900.0053
ILE 1910.0060
ARG 1920.0093
MET 1930.0056
LEU 1940.0077
LEU 1950.0107
ASN 1960.0124
GLN 1970.0141
HIS 1980.0139
SER 1990.0148
LEU 2000.0191
LEU 2010.0184
PHE 2020.0167
GLY 2030.0239
HIS 2150.0295
ILE 2160.0155
GLY 2170.0230
SER 2180.0237
ILE 2190.0101
ASN 2200.0052
PRO 2210.0189
ASN 2220.0223
CYS 2230.0063
ASN 2240.0026
VAL 2250.0096
LEU 2260.0121
GLU 2270.0128
VAL 2280.0118
ILE 2290.0158
LYS 2300.0199
ASP 2310.0183
GLY 2320.0120
TYR 2330.0177
GLU 2340.0183
ASN 2350.0163
ALA 2360.0130
ARG 2370.0182
ARG 2380.0189
LEU 2390.0185
CYS 2400.0149
ASP 2410.0150
LEU 2420.0174
TYR 2430.0075
TYR 2440.0071
ILE 2450.0226
ASN 2460.0166
SER 2470.0137
PRO 2480.0129
GLU 2490.0217
LEU 2500.0239
GLU 2510.0289
LEU 2520.0279
GLU 2530.0254
GLU 2540.0127
LEU 2550.0162
ASN 2560.0111
ALA 2570.0103
LYS 2580.0078
SER 2590.0230
PRO 2600.0411
GLY 2610.0351
GLN 2620.0260
PRO 2630.0163
ILE 2640.0122
GLN 2650.0125
VAL 2660.0160
VAL 2670.0137
TYR 2680.0125
VAL 2690.0151
PRO 2700.0127
SER 2710.0143
HIS 2720.0095
LEU 2730.0082
TYR 2740.0083
HIS 2750.0098
HIS 2750.0097
MET 2760.0044
VAL 2770.0038
PHE 2780.0018
GLU 2790.0078
LEU 2800.0039
PHE 2810.0020
LYS 2820.0056
ASN 2830.0117
ALA 2840.0126
MET 2850.0070
ARG 2860.0081
ALA 2870.0119
THR 2880.0104
MET 2890.0102
GLU 2900.0090
HIS 2910.0079
HIS 2920.0114
ALA 2930.0152
ASN 2940.0136
ARG 2950.0200
GLY 2960.0256
VAL 2970.0142
TYR 2980.0091
PRO 2990.0087
PRO 3000.0163
ILE 3010.0104
GLN 3020.0123
VAL 3030.0196
HIS 3040.0102
VAL 3050.0073
THR 3060.0043
LEU 3070.0092
GLY 3080.0111
ASN 3090.0199
GLU 3100.0171
ASP 3110.0122
LEU 3120.0101
THR 3130.0195
VAL 3140.0205
LYS 3150.0220
MET 3160.0238
SER 3170.0244
ASP 3180.0221
ARG 3190.0222
GLY 3200.0154
GLY 3210.0201
GLY 3220.0265
VAL 3230.0217
PRO 3240.0125
LEU 3250.0165
ARG 3260.0136
LYS 3270.0179
ILE 3280.0182
ASP 3290.0288
ARG 3300.0301
LEU 3310.0090
PHE 3320.0226
ASN 3330.0156
TYR 3340.0144
MET 3350.0106
TYR 3360.0081
SER 3370.0113
THR 3380.0125
ALA 3390.0177
PRO 3400.0225
ARG 3410.0100
PRO 3420.0192
ARG 3430.0080
VAL 3440.0160
GLU 3450.0204
THR 3460.0197
SER 3470.0213
ARG 3480.0213
ALA 3490.0135
VAL 3500.0315
PRO 3510.0301
LEU 3520.0172
ALA 3530.0146
GLY 3540.0217
PHE 3550.0167
GLY 3560.0208
TYR 3570.0203
GLY 3580.0237
LEU 3590.0194
PRO 3600.0246
ILE 3610.0211
SER 3620.0153
ARG 3630.0209
LEU 3640.0221
TYR 3650.0111
ALA 3660.0088
GLN 3670.0159
TYR 3680.0121
PHE 3690.0037
GLN 3700.0069
GLY 3710.0097
ASP 3720.0181
LEU 3730.0136
LYS 3740.0212
LEU 3750.0133
TYR 3760.0226
TYR 3760.0244
SER 3770.0319
LEU 3780.0293
GLU 3790.0122
GLY 3800.0117
TYR 3810.0248
GLY 3820.0330
THR 3830.0352
ASP 3840.0364
ALA 3850.0249
VAL 3860.0256
ILE 3870.0173
TYR 3880.0165
ILE 3890.0091
LYS 3900.0113
ALA 3910.0098
LEU 3920.0099
SER 3930.0103
THR 3940.0124
ASP 3950.0091
SER 3960.0058
ILE 3970.0035
GLU 3980.0058
ARG 3990.0128
LEU 4000.0145
PRO 4010.0080
VAL 4020.0031
TYR 4030.0051
ASN 4040.0074
LYS 4050.0006
ALA 4060.0093
ALA 4070.0098
TRP 4080.0060
LYS 4090.0094
HIS 4100.0127
TYR 4110.0097
ASN 4120.0086
THR 4130.0235
ASN 4140.0263
ALA 4170.0143
ASP 4180.0031
ASP 4190.0065
TRP 4200.0077
CYS 4210.0075
VAL 4220.0063
PRO 4230.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.