CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0630
GLY 410.0268
VAL 420.0193
PRO 430.0162
GLY 440.0102
GLN 450.0053
VAL 460.0052
ASP 470.0090
PHE 480.0120
TYR 490.0059
ALA 500.0039
ARG 510.0088
PHE 520.0063
SER 530.0065
PRO 540.0085
SER 550.0109
PRO 560.0125
LEU 570.0055
SER 580.0051
MET 590.0068
LYS 600.0072
GLN 610.0105
PHE 620.0077
LEU 630.0147
ASP 640.0239
PHE 650.0147
GLY 660.0231
SER 670.0630
CYS 710.0369
GLU 720.0203
LYS 730.0246
THR 740.0257
SER 750.0086
PHE 760.0054
MET 770.0113
PHE 780.0089
LEU 790.0074
ARG 800.0079
GLN 810.0095
GLU 820.0096
LEU 830.0105
PRO 840.0096
VAL 850.0056
ARG 860.0059
LEU 870.0043
ALA 880.0037
ASN 890.0024
ILE 900.0031
MET 910.0061
LYS 920.0053
GLU 930.0073
ILE 940.0078
SER 950.0095
LEU 960.0117
LEU 970.0168
PRO 980.0188
ASP 990.0222
ASN 1000.0141
LEU 1010.0150
LEU 1020.0169
ARG 1030.0113
THR 1040.0137
PRO 1050.0221
SER 1060.0166
VAL 1070.0204
GLN 1080.0234
LEU 1090.0219
VAL 1100.0218
GLN 1110.0219
SER 1120.0232
TRP 1130.0168
TYR 1140.0139
ILE 1150.0108
GLN 1160.0121
SER 1170.0028
LEU 1180.0060
GLN 1190.0117
GLU 1200.0135
LEU 1210.0122
LEU 1220.0130
ASP 1230.0088
PHE 1240.0094
LYS 1250.0124
ASP 1260.0191
LYS 1270.0151
SER 1280.0233
ALA 1290.0101
GLU 1300.0068
ASP 1310.0309
ALA 1320.0302
LYS 1330.0118
ALA 1340.0083
ILE 1350.0083
TYR 1360.0168
ASP 1370.0090
PHE 1380.0050
THR 1390.0060
ASP 1400.0052
THR 1410.0074
VAL 1420.0093
ILE 1430.0070
ARG 1440.0057
ILE 1450.0083
ARG 1460.0072
ASN 1470.0047
ARG 1480.0085
HIS 1490.0148
ASN 1500.0185
ASP 1510.0204
VAL 1520.0183
ILE 1530.0119
PRO 1540.0087
THR 1550.0084
MET 1560.0081
ALA 1570.0058
GLN 1580.0020
GLY 1590.0048
VAL 1600.0043
ILE 1610.0021
GLU 1620.0061
TYR 1630.0087
LYS 1640.0055
GLU 1650.0176
SER 1660.0099
PHE 1670.0108
ASP 1700.0221
PRO 1710.0239
VAL 1720.0156
THR 1730.0124
SER 1740.0136
GLN 1750.0171
ASN 1760.0101
VAL 1770.0110
GLN 1780.0121
TYR 1790.0080
PHE 1800.0041
LEU 1810.0055
ASP 1820.0049
ARG 1830.0031
PHE 1840.0056
TYR 1850.0058
MET 1860.0088
SER 1870.0057
ARG 1880.0106
ILE 1890.0084
SER 1900.0061
ILE 1910.0058
ARG 1920.0056
MET 1930.0061
LEU 1940.0109
LEU 1950.0114
ASN 1960.0147
GLN 1970.0180
HIS 1980.0159
SER 1990.0182
LEU 2000.0290
LEU 2010.0249
PHE 2020.0290
GLY 2030.0379
HIS 2150.0161
ILE 2160.0166
GLY 2170.0249
SER 2180.0172
ILE 2190.0054
ASN 2200.0049
PRO 2210.0136
ASN 2220.0176
CYS 2230.0054
ASN 2240.0078
VAL 2250.0078
LEU 2260.0125
GLU 2270.0194
VAL 2280.0089
ILE 2290.0061
LYS 2300.0112
ASP 2310.0063
GLY 2320.0045
TYR 2330.0061
GLU 2340.0056
ASN 2350.0101
ALA 2360.0130
ARG 2370.0174
ARG 2380.0184
LEU 2390.0186
CYS 2400.0189
ASP 2410.0238
LEU 2420.0230
TYR 2430.0161
TYR 2440.0168
ILE 2450.0329
ASN 2460.0285
SER 2470.0150
PRO 2480.0208
GLU 2490.0067
LEU 2500.0065
GLU 2510.0183
LEU 2520.0250
GLU 2530.0434
GLU 2540.0228
LEU 2550.0072
ASN 2560.0134
ALA 2570.0178
LYS 2580.0230
SER 2590.0386
PRO 2600.0241
GLY 2610.0480
GLN 2620.0415
PRO 2630.0246
ILE 2640.0217
GLN 2650.0028
VAL 2660.0026
VAL 2670.0112
TYR 2680.0102
VAL 2690.0079
PRO 2700.0084
SER 2710.0134
HIS 2720.0119
LEU 2730.0086
TYR 2740.0081
HIS 2750.0115
HIS 2750.0115
MET 2760.0088
VAL 2770.0087
PHE 2780.0088
GLU 2790.0067
LEU 2800.0080
PHE 2810.0080
LYS 2820.0105
ASN 2830.0127
ALA 2840.0120
MET 2850.0152
ARG 2860.0128
ALA 2870.0192
THR 2880.0189
MET 2890.0173
GLU 2900.0183
HIS 2910.0190
HIS 2920.0170
ALA 2930.0282
ASN 2940.0150
ARG 2950.0177
GLY 2960.0264
VAL 2970.0190
TYR 2980.0182
PRO 2990.0176
PRO 3000.0096
ILE 3010.0084
GLN 3020.0104
VAL 3030.0128
HIS 3040.0241
VAL 3050.0113
THR 3060.0208
LEU 3070.0325
GLY 3080.0305
ASN 3090.0320
GLU 3100.0268
ASP 3110.0205
LEU 3120.0237
THR 3130.0223
VAL 3140.0167
LYS 3150.0115
MET 3160.0072
SER 3170.0097
ASP 3180.0167
ARG 3190.0243
GLY 3200.0225
GLY 3210.0182
GLY 3220.0101
VAL 3230.0072
PRO 3240.0127
LEU 3250.0176
ARG 3260.0132
LYS 3270.0158
ILE 3280.0138
ASP 3290.0109
ARG 3300.0075
LEU 3310.0067
PHE 3320.0064
ASN 3330.0102
TYR 3340.0112
MET 3350.0085
TYR 3360.0131
SER 3370.0134
THR 3380.0124
ALA 3390.0233
PRO 3400.0296
ARG 3410.0207
PRO 3420.0291
ARG 3430.0363
VAL 3440.0292
GLU 3450.0110
THR 3460.0238
SER 3470.0418
ARG 3480.0360
ALA 3490.0191
VAL 3500.0227
PRO 3510.0220
LEU 3520.0144
ALA 3530.0094
GLY 3540.0081
PHE 3550.0137
GLY 3560.0111
TYR 3570.0084
GLY 3580.0072
LEU 3590.0017
PRO 3600.0059
ILE 3610.0091
SER 3620.0075
ARG 3630.0079
LEU 3640.0118
TYR 3650.0135
ALA 3660.0135
GLN 3670.0169
TYR 3680.0161
PHE 3690.0164
GLN 3700.0161
GLY 3710.0121
ASP 3720.0086
LEU 3730.0038
LYS 3740.0077
LEU 3750.0113
TYR 3760.0095
TYR 3760.0096
SER 3770.0053
LEU 3780.0244
GLU 3790.0206
GLY 3800.0270
TYR 3810.0305
GLY 3820.0228
THR 3830.0132
ASP 3840.0118
ALA 3850.0071
VAL 3860.0090
ILE 3870.0097
TYR 3880.0093
ILE 3890.0109
LYS 3900.0089
ALA 3910.0116
LEU 3920.0137
SER 3930.0133
THR 3940.0126
ASP 3950.0169
SER 3960.0148
ILE 3970.0147
GLU 3980.0148
ARG 3990.0176
LEU 4000.0124
PRO 4010.0035
VAL 4020.0031
TYR 4030.0057
ASN 4040.0061
LYS 4050.0170
ALA 4060.0184
ALA 4070.0105
TRP 4080.0087
LYS 4090.0079
HIS 4100.0071
TYR 4110.0051
ASN 4120.0056
THR 4130.0094
ASN 4140.0226
ALA 4170.0506
ASP 4180.0123
ASP 4190.0240
TRP 4200.0260
CYS 4210.0201
VAL 4220.0156
PRO 4230.0185

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.