CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0880
GLY 410.0564
VAL 420.0455
PRO 430.0880
GLY 440.0462
GLN 450.0126
VAL 460.0132
ASP 470.0173
PHE 480.0169
TYR 490.0126
ALA 500.0198
ARG 510.0476
PHE 520.0236
SER 530.0088
PRO 540.0141
SER 550.0178
PRO 560.0190
LEU 570.0179
SER 580.0166
MET 590.0208
LYS 600.0271
GLN 610.0245
PHE 620.0203
LEU 630.0214
ASP 640.0284
PHE 650.0177
GLY 660.0090
SER 670.0502
CYS 710.0188
GLU 720.0171
LYS 730.0112
THR 740.0138
SER 750.0089
PHE 760.0082
MET 770.0097
PHE 780.0089
LEU 790.0070
ARG 800.0069
GLN 810.0162
GLU 820.0138
LEU 830.0124
PRO 840.0132
VAL 850.0145
ARG 860.0149
LEU 870.0179
ALA 880.0153
ASN 890.0132
ILE 900.0107
MET 910.0161
LYS 920.0132
GLU 930.0088
ILE 940.0085
SER 950.0127
LEU 960.0156
LEU 970.0130
PRO 980.0106
ASP 990.0073
ASN 1000.0056
LEU 1010.0051
LEU 1020.0080
ARG 1030.0103
THR 1040.0152
PRO 1050.0176
SER 1060.0140
VAL 1070.0177
GLN 1080.0259
LEU 1090.0172
VAL 1100.0139
GLN 1110.0215
SER 1120.0217
TRP 1130.0133
TYR 1140.0235
ILE 1150.0251
GLN 1160.0155
SER 1170.0180
LEU 1180.0179
GLN 1190.0154
GLU 1200.0124
LEU 1210.0115
LEU 1220.0108
ASP 1230.0101
PHE 1240.0094
LYS 1250.0073
ASP 1260.0118
LYS 1270.0135
SER 1280.0145
ALA 1290.0113
GLU 1300.0088
ASP 1310.0096
ALA 1320.0099
LYS 1330.0089
ALA 1340.0055
ILE 1350.0088
TYR 1360.0040
ASP 1370.0046
PHE 1380.0051
THR 1390.0112
ASP 1400.0082
THR 1410.0117
VAL 1420.0146
ILE 1430.0149
ARG 1440.0174
ILE 1450.0207
ARG 1460.0205
ASN 1470.0228
ARG 1480.0271
HIS 1490.0329
ASN 1500.0459
ASP 1510.0427
VAL 1520.0216
ILE 1530.0148
PRO 1540.0141
THR 1550.0107
MET 1560.0070
ALA 1570.0086
GLN 1580.0117
GLY 1590.0080
VAL 1600.0097
ILE 1610.0139
GLU 1620.0053
TYR 1630.0054
LYS 1640.0099
GLU 1650.0216
SER 1660.0071
PHE 1670.0156
ASP 1700.0287
PRO 1710.0193
VAL 1720.0126
THR 1730.0135
SER 1740.0223
GLN 1750.0228
ASN 1760.0183
VAL 1770.0169
GLN 1780.0180
TYR 1790.0174
PHE 1800.0120
LEU 1810.0093
ASP 1820.0090
ARG 1830.0078
PHE 1840.0067
TYR 1850.0051
MET 1860.0077
SER 1870.0114
ARG 1880.0196
ILE 1890.0162
SER 1900.0113
ILE 1910.0097
ARG 1920.0181
MET 1930.0143
LEU 1940.0106
LEU 1950.0146
ASN 1960.0120
GLN 1970.0165
HIS 1980.0201
SER 1990.0181
LEU 2000.0234
LEU 2010.0273
PHE 2020.0246
GLY 2030.0300
HIS 2150.0161
ILE 2160.0177
GLY 2170.0256
SER 2180.0205
ILE 2190.0155
ASN 2200.0104
PRO 2210.0073
ASN 2220.0032
CYS 2230.0038
ASN 2240.0024
VAL 2250.0061
LEU 2260.0077
GLU 2270.0055
VAL 2280.0066
ILE 2290.0072
LYS 2300.0085
ASP 2310.0052
GLY 2320.0043
TYR 2330.0047
GLU 2340.0024
ASN 2350.0055
ALA 2360.0055
ARG 2370.0064
ARG 2380.0104
LEU 2390.0079
CYS 2400.0074
ASP 2410.0100
LEU 2420.0094
TYR 2430.0040
TYR 2440.0049
ILE 2450.0142
ASN 2460.0113
SER 2470.0081
PRO 2480.0045
GLU 2490.0048
LEU 2500.0104
GLU 2510.0148
LEU 2520.0142
GLU 2530.0230
GLU 2540.0155
LEU 2550.0218
ASN 2560.0109
ALA 2570.0120
LYS 2580.0093
SER 2590.0199
PRO 2600.0315
GLY 2610.0205
GLN 2620.0196
PRO 2630.0073
ILE 2640.0045
GLN 2650.0018
VAL 2660.0039
VAL 2670.0094
TYR 2680.0060
VAL 2690.0089
PRO 2700.0067
SER 2710.0068
HIS 2720.0070
LEU 2730.0046
TYR 2740.0049
HIS 2750.0082
HIS 2750.0082
MET 2760.0064
VAL 2770.0034
PHE 2780.0042
GLU 2790.0078
LEU 2800.0057
PHE 2810.0018
LYS 2820.0041
ASN 2830.0063
ALA 2840.0048
MET 2850.0060
ARG 2860.0064
ALA 2870.0068
THR 2880.0067
MET 2890.0086
GLU 2900.0081
HIS 2910.0074
HIS 2920.0063
ALA 2930.0101
ASN 2940.0069
ARG 2950.0092
GLY 2960.0146
VAL 2970.0101
TYR 2980.0114
PRO 2990.0048
PRO 3000.0056
ILE 3010.0075
GLN 3020.0106
VAL 3030.0096
HIS 3040.0031
VAL 3050.0039
THR 3060.0110
LEU 3070.0134
GLY 3080.0158
ASN 3090.0257
GLU 3100.0035
ASP 3110.0060
LEU 3120.0089
THR 3130.0171
VAL 3140.0158
LYS 3150.0160
MET 3160.0171
SER 3170.0139
ASP 3180.0085
ARG 3190.0034
GLY 3200.0054
GLY 3210.0037
GLY 3220.0062
VAL 3230.0094
PRO 3240.0097
LEU 3250.0101
ARG 3260.0080
LYS 3270.0099
ILE 3280.0070
ASP 3290.0216
ARG 3300.0150
LEU 3310.0134
PHE 3320.0191
ASN 3330.0157
TYR 3340.0126
MET 3350.0108
TYR 3360.0076
SER 3370.0038
THR 3380.0068
ALA 3390.0273
PRO 3400.0525
ARG 3410.0353
PRO 3420.0412
ARG 3430.0144
VAL 3440.0168
GLU 3450.0109
THR 3460.0089
SER 3470.0270
ARG 3480.0059
ALA 3490.0107
VAL 3500.0086
PRO 3510.0035
LEU 3520.0012
ALA 3530.0123
GLY 3540.0211
PHE 3550.0166
GLY 3560.0102
TYR 3570.0105
GLY 3580.0130
LEU 3590.0136
PRO 3600.0137
ILE 3610.0079
SER 3620.0076
ARG 3630.0062
LEU 3640.0041
TYR 3650.0066
ALA 3660.0056
GLN 3670.0100
TYR 3680.0108
PHE 3690.0090
GLN 3700.0091
GLY 3710.0126
ASP 3720.0121
LEU 3730.0086
LYS 3740.0139
LEU 3750.0073
TYR 3760.0156
TYR 3760.0170
SER 3770.0081
LEU 3780.0081
GLU 3790.0144
GLY 3800.0077
TYR 3810.0046
GLY 3820.0061
THR 3830.0134
ASP 3840.0216
ALA 3850.0176
VAL 3860.0225
ILE 3870.0158
TYR 3880.0157
ILE 3890.0050
LYS 3900.0018
ALA 3910.0090
LEU 3920.0167
SER 3930.0215
THR 3940.0196
ASP 3950.0147
SER 3960.0056
ILE 3970.0078
GLU 3980.0152
ARG 3990.0165
LEU 4000.0193
PRO 4010.0082
VAL 4020.0056
TYR 4030.0075
ASN 4040.0073
LYS 4050.0291
ALA 4060.0222
ALA 4070.0194
TRP 4080.0197
LYS 4090.0184
HIS 4100.0119
TYR 4110.0131
ASN 4120.0141
THR 4130.0209
ASN 4140.0345
ALA 4170.0131
ASP 4180.0043
ASP 4190.0075
TRP 4200.0084
CYS 4210.0036
VAL 4220.0031
PRO 4230.0072

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.