CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 10-JUL-18 6H0U  ***

Normal Mode Analysis for ID 2604162352552689327

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5465
mode 8 1.07 0.5930
mode 9 1.51 0.6486
mode 10 2.06 0.5677
mode 11 2.24 0.5034
mode 12 2.36 0.4561
mode 13 2.39 0.3376
mode 14 2.56 0.5961
mode 15 2.61 0.5097
mode 16 2.62 0.5209
mode 17 2.65 0.5303
mode 18 2.82 0.5852
mode 19 3.36 0.4039
mode 20 3.44 0.3343
mode 21 3.48 0.3840
mode 22 3.57 0.5534
mode 23 3.61 0.1616
mode 24 3.70 0.4434
mode 25 3.72 0.4510
mode 26 3.80 0.2767
mode 27 3.89 0.4220
mode 28 3.99 0.2295
mode 29 4.03 0.4662
mode 30 4.11 0.2406
mode 31 4.13 0.2921
mode 32 4.20 0.3890
mode 33 4.30 0.4994
mode 34 4.35 0.2715
mode 35 4.43 0.4037
mode 36 4.46 0.3535
mode 37 4.48 0.4552
mode 38 4.63 0.3586
mode 39 4.70 0.1753
mode 40 4.71 0.3127
mode 41 4.76 0.1109
mode 42 4.82 0.2842
mode 43 4.90 0.3789
mode 44 4.94 0.2135
mode 45 4.97 0.2492
mode 46 5.03 0.2951
mode 47 5.09 0.2569
mode 48 5.09 0.3125
mode 49 5.18 0.3062
mode 50 5.20 0.2799
mode 51 5.22 0.2524
mode 52 5.41 0.4571
mode 53 5.48 0.3966
mode 54 5.51 0.2757
mode 55 5.57 0.3399
mode 56 5.59 0.3556
mode 57 5.60 0.3851
mode 58 5.67 0.3176
mode 59 5.80 0.4205
mode 60 5.83 0.4290
mode 61 5.91 0.3356
mode 62 5.97 0.4822
mode 63 6.00 0.4424
mode 64 6.06 0.4177
mode 65 6.11 0.4608
mode 66 6.17 0.3849
mode 67 6.22 0.3420
mode 68 6.32 0.4269
mode 69 6.34 0.4819
mode 70 6.37 0.3355
mode 71 6.40 0.3702
mode 72 6.41 0.5392
mode 73 6.50 0.4695
mode 74 6.53 0.2936
mode 75 6.56 0.3810
mode 76 6.62 0.1938
mode 77 6.68 0.3723
mode 78 6.70 0.4157
mode 79 6.74 0.4506
mode 80 6.78 0.2948
mode 81 6.82 0.3532
mode 82 6.86 0.4437
mode 83 6.88 0.3290
mode 84 6.91 0.2946
mode 85 6.95 0.2969
mode 86 7.03 0.4127
mode 87 7.03 0.5183
mode 88 7.09 0.3966
mode 89 7.10 0.3500
mode 90 7.16 0.4604
mode 91 7.20 0.4110
mode 92 7.26 0.4462
mode 93 7.33 0.3532
mode 94 7.34 0.2957
mode 95 7.38 0.4480
mode 96 7.41 0.2555
mode 97 7.44 0.4875
mode 98 7.50 0.5794
mode 99 7.53 0.4568
mode 100 7.59 0.5657
mode 101 7.68 0.4936
mode 102 7.71 0.3916
mode 103 7.72 0.3576
mode 104 7.75 0.4406
mode 105 7.78 0.4511
mode 106 7.82 0.4922

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.