CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA distance fluctuations for 2604171025022908468

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
SER 52 0.26 MET 0 -0.17 ALA 15
SER 52 0.14 ILE 1 -0.23 ALA 15
SER 52 0.16 GLN 2 -0.21 ALA 15
THR 86 0.15 ARG 3 -0.24 ALA 15
LYS 58 0.14 THR 4 -0.21 LYS 6
GLY 29 0.15 PRO 5 -0.21 ALA 15
LYS 58 0.18 LYS 6 -0.24 ARG 3
SER 57 0.15 ILE 7 -0.21 GLN 8
GLU 74 0.22 GLN 8 -0.25 LYS 19
GLU 74 0.22 VAL 9 -0.25 LYS 19
GLU 74 0.35 TYR 10 -0.32 LYS 19
GLU 74 0.38 SER 11 -0.33 LYS 19
GLU 74 0.39 ARG 12 -0.35 LYS 19
GLU 74 0.43 HIS 13 -0.29 GLY 18
GLU 74 0.31 PRO 14 -0.48 GLU 50
GLU 74 0.71 ALA 15 -0.72 HIS 51
GLU 74 0.31 GLU 16 -0.85 GLU 50
SER 55 0.27 ASN 17 -0.25 THR 71
GLU 74 0.33 GLY 18 -0.29 HIS 13
LYS 48 0.29 LYS 19 -0.38 ASP 96
HIS 51 0.28 SER 20 -0.32 THR 71
HIS 13 0.22 ASN 21 -0.19 SER 20
ASP 34 0.19 PHE 22 -0.26 GLU 16
GLU 74 0.20 LEU 23 -0.21 GLU 16
GLU 74 0.21 ASN 24 -0.19 GLU 16
GLU 74 0.17 CYS 25 -0.19 GLU 16
GLU 74 0.19 TYR 26 -0.25 ALA 15
GLU 74 0.14 VAL 27 -0.25 ALA 15
GLU 74 0.16 SER 28 -0.27 ALA 15
LYS 58 0.19 GLY 29 -0.28 ALA 15
SER 52 0.12 PHE 30 -0.24 ALA 15
SER 52 0.20 HIS 31 -0.22 ALA 15
SER 52 0.30 PRO 32 -0.19 ALA 15
ASP 53 0.37 SER 33 -0.22 ASP 59
SER 52 0.51 ASP 34 -0.22 ASP 59
SER 52 0.42 ILE 35 -0.20 ASP 59
GLU 50 0.32 GLU 36 -0.24 LEU 54
ASN 83 0.20 VAL 37 -0.30 LEU 54
LYS 48 0.14 ASP 38 -0.30 GLU 16
PHE 70 0.11 LEU 39 -0.29 GLU 16
THR 71 0.08 LEU 40 -0.24 GLU 16
GLY 18 0.10 LYS 41 -0.21 GLU 16
ALA 15 0.12 ASN 42 -0.14 GLU 16
VAL 93 0.14 GLY 43 -0.17 GLU 16
VAL 93 0.12 GLU 44 -0.26 GLU 16
THR 71 0.14 ARG 45 -0.32 GLU 16
THR 71 0.18 ILE 46 -0.40 GLU 16
LYS 19 0.25 GLU 47 -0.49 GLU 16
LYS 19 0.29 LYS 48 -0.62 GLU 16
GLU 36 0.31 VAL 49 -0.63 GLU 16
ASP 34 0.38 GLU 50 -0.85 GLU 16
ASP 34 0.43 HIS 51 -0.74 GLU 16
ASP 34 0.51 SER 52 -0.59 ALA 15
ASP 34 0.43 ASP 53 -0.61 ALA 15
SER 20 0.27 LEU 54 -0.40 ALA 15
ASN 17 0.27 SER 55 -0.37 ALA 15
ASN 17 0.22 PHE 56 -0.32 ALA 15
GLU 74 0.19 SER 57 -0.32 ALA 15
GLY 29 0.19 LYS 58 -0.28 ALA 15
ASN 17 0.19 ASP 59 -0.26 ALA 15
ASN 17 0.15 TRP 60 -0.26 ALA 15
GLY 29 0.16 SER 61 -0.28 ALA 15
ASN 17 0.17 PHE 62 -0.30 ALA 15
ASN 17 0.16 TYR 63 -0.34 ALA 15
ASP 34 0.28 LEU 64 -0.38 ALA 15
ASP 34 0.29 LEU 65 -0.44 ALA 15
ASP 34 0.33 TYR 66 -0.43 ALA 15
ASP 34 0.28 TYR 67 -0.46 GLU 16
ASP 34 0.27 THR 68 -0.60 GLU 16
ASP 34 0.25 GLU 69 -0.55 GLU 16
ASP 34 0.18 PHE 70 -0.35 GLU 16
GLY 18 0.27 THR 71 -0.32 SER 20
ALA 15 0.34 PRO 72 -0.26 SER 20
ALA 15 0.52 THR 73 -0.21 SER 20
ALA 15 0.71 GLU 74 -0.13 GLN 89
ALA 15 0.50 LYS 75 -0.13 SER 20
ALA 15 0.32 ASP 76 -0.17 SER 20
ALA 15 0.26 GLU 77 -0.16 GLN 89
ALA 15 0.15 TYR 78 -0.12 GLN 89
GLN 8 0.15 ALA 79 -0.13 LYS 19
GLN 8 0.09 CYS 80 -0.18 GLU 16
LYS 6 0.10 ARG 81 -0.19 GLU 16
GLU 50 0.14 VAL 82 -0.18 GLU 16
GLU 50 0.22 ASN 83 -0.16 GLU 16
SER 52 0.27 HIS 84 -0.15 ALA 15
SER 52 0.28 VAL 85 -0.14 ALA 15
SER 52 0.19 THR 86 -0.17 ASP 96
SER 52 0.15 LEU 87 -0.20 ASP 96
LYS 48 0.18 SER 88 -0.24 ASP 96
GLU 47 0.17 GLN 89 -0.24 LYS 94
LYS 48 0.15 PRO 90 -0.17 LYS 94
LYS 6 0.10 LYS 91 -0.24 VAL 93
LYS 6 0.17 ILE 92 -0.20 GLN 89
GLY 43 0.14 VAL 93 -0.24 LYS 91
GLN 8 0.21 LYS 94 -0.24 GLN 89
GLU 74 0.24 TRP 95 -0.26 LYS 19
ALA 15 0.38 ASP 96 -0.38 LYS 19

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.