CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171025022908468

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0796
ILE 1GLN 2 -0.0701
GLN 2ARG 3 -0.0765
ARG 3THR 4 0.0004
THR 4PRO 5 -0.0448
PRO 5LYS 6 -0.0602
LYS 6ILE 7 -0.0013
ILE 7GLN 8 -0.0067
GLN 8VAL 9 0.0468
VAL 9TYR 10 0.0123
TYR 10SER 11 0.2111
SER 11ARG 12 -0.2247
ARG 12HIS 13 0.2739
HIS 13PRO 14 -0.2861
PRO 14ALA 15 0.2305
ALA 15GLU 16 0.0204
GLU 16ASN 17 0.1688
ASN 17GLY 18 0.0530
GLY 18LYS 19 0.1323
LYS 19SER 20 -0.1140
SER 20ASN 21 0.2357
ASN 21PHE 22 0.1128
PHE 22LEU 23 -0.2031
LEU 23ASN 24 0.1060
ASN 24CYS 25 0.0455
CYS 25TYR 26 0.1179
TYR 26VAL 27 0.1444
VAL 27SER 28 0.0433
SER 28GLY 29 -0.0096
GLY 29PHE 30 0.0240
PHE 30HIS 31 0.0353
HIS 31PRO 32 -0.1168
PRO 32SER 33 0.1654
SER 33ASP 34 -0.1351
ASP 34ILE 35 -0.0470
ILE 35GLU 36 -0.2155
GLU 36VAL 37 0.0806
VAL 37ASP 38 -0.1018
ASP 38LEU 39 -0.0032
LEU 39LEU 40 -0.0604
LEU 40LYS 41 -0.0787
LYS 41ASN 42 0.0669
ASN 42GLY 43 -0.1562
GLY 43GLU 44 0.0429
GLU 44ARG 45 -0.0403
ARG 45ILE 46 -0.1146
ILE 46GLU 47 0.1491
GLU 47LYS 48 -0.0698
LYS 48VAL 49 0.0168
VAL 49GLU 50 0.0210
GLU 50HIS 51 -0.0157
HIS 51SER 52 -0.0246
SER 52ASP 53 -0.0640
ASP 53LEU 54 0.2755
LEU 54SER 55 -0.0809
SER 55PHE 56 -0.0087
PHE 56SER 57 -0.0703
SER 57LYS 58 0.0066
LYS 58ASP 59 -0.0423
ASP 59TRP 60 0.0662
TRP 60SER 61 0.0084
SER 61PHE 62 0.0653
PHE 62TYR 63 0.1277
TYR 63LEU 64 -0.0209
LEU 64LEU 65 0.2414
LEU 65TYR 66 -0.0244
TYR 66TYR 67 0.0051
TYR 67THR 68 0.0320
THR 68GLU 69 -0.0199
GLU 69PHE 70 0.0966
PHE 70THR 71 0.3474
THR 71PRO 72 -0.0245
PRO 72THR 73 0.1153
THR 73GLU 74 0.1339
GLU 74LYS 75 -0.0832
LYS 75ASP 76 -0.0278
ASP 76GLU 77 -0.1865
GLU 77TYR 78 -0.1286
TYR 78ALA 79 -0.3306
ALA 79CYS 80 -0.1801
CYS 80ARG 81 -0.0314
ARG 81VAL 82 -0.1046
VAL 82ASN 83 -0.0068
ASN 83HIS 84 -0.1270
HIS 84VAL 85 0.0359
VAL 85THR 86 0.0164
THR 86LEU 87 -0.1332
LEU 87SER 88 0.0338
SER 88GLN 89 -0.0291
GLN 89PRO 90 -0.0523
PRO 90LYS 91 0.1070
LYS 91ILE 92 -0.3108
ILE 92VAL 93 0.0764
VAL 93LYS 94 -0.2526
LYS 94TRP 95 -0.1474
TRP 95ASP 96 0.0077

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.