CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171025022908468

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0950
ILE 1GLN 2 0.0234
GLN 2ARG 3 0.1002
ARG 3THR 4 0.1889
THR 4PRO 5 0.0760
PRO 5LYS 6 0.1687
LYS 6ILE 7 0.2537
ILE 7GLN 8 0.1489
GLN 8VAL 9 0.3608
VAL 9TYR 10 -0.0091
TYR 10SER 11 0.2420
SER 11ARG 12 -0.0002
ARG 12HIS 13 0.2272
HIS 13PRO 14 -0.0751
PRO 14ALA 15 -0.1614
ALA 15GLU 16 0.0467
GLU 16ASN 17 0.0065
ASN 17GLY 18 -0.0007
GLY 18LYS 19 0.1462
LYS 19SER 20 -0.0722
SER 20ASN 21 0.0175
ASN 21PHE 22 0.0125
PHE 22LEU 23 -0.0575
LEU 23ASN 24 0.0984
ASN 24CYS 25 0.0395
CYS 25TYR 26 0.1514
TYR 26VAL 27 0.1880
VAL 27SER 28 0.0288
SER 28GLY 29 0.2862
GLY 29PHE 30 0.0012
PHE 30HIS 31 0.0727
HIS 31PRO 32 0.0888
PRO 32SER 33 -0.0412
SER 33ASP 34 0.0717
ASP 34ILE 35 -0.2176
ILE 35GLU 36 -0.4025
GLU 36VAL 37 -0.0405
VAL 37ASP 38 -0.2809
ASP 38LEU 39 -0.1149
LEU 39LEU 40 -0.0143
LEU 40LYS 41 -0.1349
LYS 41ASN 42 -0.0123
ASN 42GLY 43 -0.1108
GLY 43GLU 44 0.0608
GLU 44ARG 45 -0.1063
ARG 45ILE 46 -0.0197
ILE 46GLU 47 0.0243
GLU 47LYS 48 -0.0311
LYS 48VAL 49 -0.0212
VAL 49GLU 50 0.0539
GLU 50HIS 51 -0.0718
HIS 51SER 52 -0.2133
SER 52ASP 53 0.0384
ASP 53LEU 54 -0.3667
LEU 54SER 55 -0.0758
SER 55PHE 56 -0.0359
PHE 56SER 57 -0.0071
SER 57LYS 58 0.0359
LYS 58ASP 59 0.0153
ASP 59TRP 60 0.0363
TRP 60SER 61 0.0789
SER 61PHE 62 0.0379
PHE 62TYR 63 0.0074
TYR 63LEU 64 0.0354
LEU 64LEU 65 0.0279
LEU 65TYR 66 0.0275
TYR 66TYR 67 -0.0685
TYR 67THR 68 -0.0136
THR 68GLU 69 -0.0855
GLU 69PHE 70 -0.0995
PHE 70THR 71 -0.1278
THR 71PRO 72 0.0577
PRO 72THR 73 0.0129
THR 73GLU 74 -0.0829
GLU 74LYS 75 0.0100
LYS 75ASP 76 0.0111
ASP 76GLU 77 0.1112
GLU 77TYR 78 0.0899
TYR 78ALA 79 0.0690
ALA 79CYS 80 0.0618
CYS 80ARG 81 -0.0476
ARG 81VAL 82 -0.0317
VAL 82ASN 83 -0.0267
ASN 83HIS 84 -0.2338
HIS 84VAL 85 -0.2149
VAL 85THR 86 0.1228
THR 86LEU 87 -0.0293
LEU 87SER 88 -0.0360
SER 88GLN 89 0.0214
GLN 89PRO 90 0.0167
PRO 90LYS 91 -0.0298
LYS 91ILE 92 0.1267
ILE 92VAL 93 -0.0702
VAL 93LYS 94 0.2222
LYS 94TRP 95 0.0059
TRP 95ASP 96 -0.0288

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.