CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

Normal Mode Analysis for ID 2604171025022908468

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1461
mode 8 1.12 0.2508
mode 9 1.31 0.4207
mode 10 1.36 0.1563
mode 11 1.57 0.3084
mode 12 1.78 0.2020
mode 13 1.86 0.4371
mode 14 2.03 0.1659
mode 15 2.17 0.1087
mode 16 2.28 0.0667
mode 17 2.33 0.1116
mode 18 2.42 0.4832
mode 19 2.48 0.1227
mode 20 2.59 0.2713
mode 21 2.65 0.1578
mode 22 2.73 0.4003
mode 23 2.76 0.2597
mode 24 2.83 0.2337
mode 25 2.88 0.2539
mode 26 2.98 0.2752
mode 27 3.08 0.2844
mode 28 3.14 0.3332
mode 29 3.20 0.2342
mode 30 3.24 0.2091
mode 31 3.30 0.0682
mode 32 3.36 0.1969
mode 33 3.46 0.1552
mode 34 3.53 0.3474
mode 35 3.59 0.2188
mode 36 3.69 0.4547
mode 37 3.70 0.3031
mode 38 3.85 0.1772
mode 39 3.86 0.3714
mode 40 3.97 0.2411
mode 41 4.04 0.0942
mode 42 4.08 0.4170
mode 43 4.15 0.1705
mode 44 4.23 0.3594
mode 45 4.29 0.3554
mode 46 4.32 0.3556
mode 47 4.36 0.4339
mode 48 4.40 0.4978
mode 49 4.44 0.3685
mode 50 4.49 0.3537
mode 51 4.57 0.4529
mode 52 4.58 0.2109
mode 53 4.66 0.2275
mode 54 4.70 0.4773
mode 55 4.75 0.4662
mode 56 4.76 0.0662
mode 57 4.82 0.2658
mode 58 4.87 0.3456
mode 59 4.87 0.3049
mode 60 4.95 0.3197
mode 61 4.98 0.4495
mode 62 5.02 0.4023
mode 63 5.16 0.3773
mode 64 5.18 0.2885
mode 65 5.19 0.4014
mode 66 5.28 0.3982
mode 67 5.42 0.3784
mode 68 5.44 0.3471
mode 69 5.47 0.3062
mode 70 5.49 0.3756
mode 71 5.51 0.4280
mode 72 5.53 0.5341
mode 73 5.62 0.4223
mode 74 5.68 0.0748
mode 75 5.70 0.3150
mode 76 5.70 0.3852
mode 77 5.74 0.3969
mode 78 5.77 0.4503
mode 79 5.81 0.1408
mode 80 5.82 0.4454
mode 81 5.84 0.4129
mode 82 5.87 0.1494
mode 83 5.90 0.4162
mode 84 5.92 0.4554
mode 85 5.99 0.4793
mode 86 6.03 0.1033
mode 87 6.07 0.2415
mode 88 6.13 0.3564
mode 89 6.16 0.4562
mode 90 6.17 0.3493
mode 91 6.19 0.4162
mode 92 6.21 0.2540
mode 93 6.26 0.2724
mode 94 6.31 0.4087
mode 95 6.33 0.1782
mode 96 6.37 0.2320
mode 97 6.41 0.4601
mode 98 6.43 0.4481
mode 99 6.44 0.3223
mode 100 6.45 0.4418
mode 101 6.48 0.3380
mode 102 6.51 0.4484
mode 103 6.54 0.3869
mode 104 6.56 0.4545
mode 105 6.62 0.3362
mode 106 6.65 0.1065

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.