CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171037472916018

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0489
ILE 1GLN 2 -0.0582
GLN 2ARG 3 -0.0641
ARG 3THR 4 0.0444
THR 4PRO 5 -0.0348
PRO 5LYS 6 -0.0607
LYS 6ILE 7 0.0405
ILE 7GLN 8 -0.0214
GLN 8VAL 9 0.0853
VAL 9TYR 10 -0.0121
TYR 10SER 11 0.2102
SER 11ARG 12 -0.2237
ARG 12HIS 13 0.2452
HIS 13PRO 14 -0.2691
PRO 14ALA 15 0.2007
ALA 15GLU 16 0.0214
GLU 16ASN 17 0.1682
ASN 17GLY 18 0.0513
GLY 18LYS 19 0.1317
LYS 19SER 20 -0.1195
SER 20ASN 21 0.2288
ASN 21PHE 22 0.1085
PHE 22LEU 23 -0.1971
LEU 23ASN 24 0.1094
ASN 24CYS 25 0.0391
CYS 25TYR 26 0.1316
TYR 26VAL 27 0.1468
VAL 27SER 28 0.0513
SER 28GLY 29 0.0211
GLY 29PHE 30 0.0232
PHE 30HIS 31 0.0390
HIS 31PRO 32 -0.1018
PRO 32SER 33 0.1603
SER 33ASP 34 -0.1172
ASP 34ILE 35 -0.0782
ILE 35GLU 36 -0.2644
GLU 36VAL 37 0.0824
VAL 37ASP 38 -0.1319
ASP 38LEU 39 -0.0084
LEU 39LEU 40 -0.0646
LEU 40LYS 41 -0.0686
LYS 41ASN 42 0.0669
ASN 42GLY 43 -0.1664
GLY 43GLU 44 0.0410
GLU 44ARG 45 -0.0499
ARG 45ILE 46 -0.1119
ILE 46GLU 47 0.1628
GLU 47LYS 48 -0.0604
LYS 48VAL 49 0.0029
VAL 49GLU 50 0.0281
GLU 50HIS 51 -0.0279
HIS 51SER 52 -0.0414
SER 52ASP 53 -0.0691
ASP 53LEU 54 0.2344
LEU 54SER 55 -0.0950
SER 55PHE 56 -0.0256
PHE 56SER 57 -0.0715
SER 57LYS 58 0.0107
LYS 58ASP 59 -0.0398
ASP 59TRP 60 0.0723
TRP 60SER 61 0.0180
SER 61PHE 62 0.0664
PHE 62TYR 63 0.1183
TYR 63LEU 64 -0.0245
LEU 64LEU 65 0.2308
LEU 65TYR 66 -0.0306
TYR 66TYR 67 0.0037
TYR 67THR 68 0.0337
THR 68GLU 69 -0.0128
GLU 69PHE 70 0.0848
PHE 70THR 71 0.3604
THR 71PRO 72 -0.0840
PRO 72THR 73 0.0972
THR 73GLU 74 0.1183
GLU 74LYS 75 -0.1441
LYS 75GLU 77 -0.3340
GLU 77TYR 78 -0.1802
TYR 78ALA 79 -0.3085
ALA 79CYS 80 -0.1713
CYS 80ARG 81 -0.0408
ARG 81VAL 82 -0.0985
VAL 82ASN 83 -0.0156
ASN 83HIS 84 -0.1438
HIS 84VAL 85 0.0066
VAL 85THR 86 0.0267
THR 86LEU 87 -0.1214
LEU 87SER 88 0.0035
SER 88GLN 89 -0.0253
GLN 89PRO 90 -0.0282
PRO 90LYS 91 0.0917
LYS 91ILE 92 -0.2895
ILE 92VAL 93 0.0604
VAL 93LYS 94 -0.2384
LYS 94TRP 95 -0.1696
TRP 95ASP 96 -0.0020

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.