CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

Normal Mode Analysis for ID 2604171037472916018

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1478
mode 8 1.12 0.2515
mode 9 1.30 0.3903
mode 10 1.36 0.1544
mode 11 1.56 0.3134
mode 12 1.76 0.2088
mode 13 1.85 0.4616
mode 14 2.02 0.1712
mode 15 2.14 0.1298
mode 16 2.27 0.0984
mode 17 2.33 0.0873
mode 18 2.38 0.1784
mode 19 2.43 0.4329
mode 20 2.55 0.1702
mode 21 2.65 0.1907
mode 22 2.73 0.4362
mode 23 2.76 0.2935
mode 24 2.81 0.2272
mode 25 2.87 0.2815
mode 26 2.96 0.2244
mode 27 3.05 0.3446
mode 28 3.14 0.3401
mode 29 3.20 0.2478
mode 30 3.24 0.2058
mode 31 3.29 0.0708
mode 32 3.35 0.2028
mode 33 3.46 0.1675
mode 34 3.51 0.3498
mode 35 3.59 0.2110
mode 36 3.67 0.3182
mode 37 3.69 0.4484
mode 38 3.79 0.1930
mode 39 3.86 0.3767
mode 40 3.93 0.2512
mode 41 4.03 0.0609
mode 42 4.04 0.3348
mode 43 4.12 0.1689
mode 44 4.19 0.3140
mode 45 4.27 0.4641
mode 46 4.31 0.3871
mode 47 4.36 0.4030
mode 48 4.36 0.4622
mode 49 4.43 0.3687
mode 50 4.49 0.3811
mode 51 4.57 0.4006
mode 52 4.58 0.3056
mode 53 4.64 0.4280
mode 54 4.66 0.2290
mode 55 4.72 0.4972
mode 56 4.76 0.0495
mode 57 4.80 0.2832
mode 58 4.86 0.4046
mode 59 4.87 0.2439
mode 60 4.95 0.4162
mode 61 4.95 0.3020
mode 62 4.99 0.3691
mode 63 5.14 0.3273
mode 64 5.17 0.4002
mode 65 5.19 0.2840
mode 66 5.27 0.3946
mode 67 5.36 0.2612
mode 68 5.39 0.2863
mode 69 5.44 0.4326
mode 70 5.46 0.4896
mode 71 5.50 0.5260
mode 72 5.52 0.4309
mode 73 5.60 0.4100
mode 74 5.64 0.3329
mode 75 5.67 0.1685
mode 76 5.69 0.2139
mode 77 5.73 0.4265
mode 78 5.76 0.3870
mode 79 5.79 0.1991
mode 80 5.81 0.3104
mode 81 5.83 0.5079
mode 82 5.85 0.3498
mode 83 5.87 0.1650
mode 84 5.90 0.4039
mode 85 5.94 0.3656
mode 86 6.02 0.3959
mode 87 6.03 0.2410
mode 88 6.06 0.1601
mode 89 6.11 0.3527
mode 90 6.16 0.4190
mode 91 6.17 0.4195
mode 92 6.20 0.4623
mode 93 6.23 0.2543
mode 94 6.27 0.3128
mode 95 6.31 0.1085
mode 96 6.33 0.3900
mode 97 6.39 0.4009
mode 98 6.40 0.3168
mode 99 6.41 0.5539
mode 100 6.43 0.3588
mode 101 6.44 0.1970
mode 102 6.50 0.4404
mode 103 6.51 0.3051
mode 104 6.54 0.3947
mode 105 6.61 0.3022
mode 106 6.61 0.4306

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.