CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171627183042169

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0939
ILE 1GLN 2 0.0264
GLN 2ARG 3 0.0822
ARG 3THR 4 -0.0244
THR 4PRO 5 0.0410
PRO 5LYS 6 0.1765
LYS 6ILE 7 -0.0664
ILE 7GLN 8 0.2140
GLN 8VAL 9 -0.1226
VAL 9TYR 10 0.1386
TYR 10SER 11 0.1508
SER 11ARG 12 -0.1560
ARG 12HIS 13 0.1206
HIS 13PRO 14 -0.1135
PRO 14ALA 15 0.2002
ALA 15GLU 16 -0.0373
GLU 16ASN 17 -0.0089
ASN 17GLY 18 0.0511
GLY 18LYS 19 -0.0657
LYS 19SER 20 -0.0580
SER 20ASN 21 0.1874
ASN 21PHE 22 -0.0861
PHE 22LEU 23 0.0639
LEU 23ASN 24 -0.0313
ASN 24CYS 25 0.0207
CYS 25TYR 26 -0.0365
TYR 26VAL 27 -0.0019
VAL 27SER 28 -0.0306
SER 28GLY 29 0.0881
GLY 29PHE 30 -0.0067
PHE 30HIS 31 0.0079
HIS 31PRO 32 0.0927
PRO 32SER 33 -0.1186
SER 33ASP 34 0.0859
ASP 34ILE 35 -0.0036
ILE 35GLU 36 0.1141
GLU 36VAL 37 -0.1117
VAL 37ASP 38 0.0928
ASP 38LEU 39 -0.0497
LEU 39LEU 40 0.0533
LEU 40LYS 41 0.0565
LYS 41ASN 42 0.0250
ASN 42GLY 43 0.1052
GLY 43GLU 44 -0.0142
GLU 44ARG 45 0.0662
ARG 45ILE 46 0.0090
ILE 46GLU 47 -0.0618
GLU 47LYS 48 -0.0596
LYS 48VAL 49 0.0451
VAL 49GLU 50 -0.0121
GLU 50HIS 51 0.0003
HIS 51SER 52 -0.0646
SER 52ASP 53 0.1260
ASP 53LEU 54 -0.2354
LEU 54SER 55 0.0974
SER 55PHE 56 0.0747
PHE 56SER 57 0.0713
SER 57LYS 58 0.0271
LYS 58ASP 59 0.0325
ASP 59TRP 60 -0.0549
TRP 60SER 61 0.0292
SER 61PHE 62 -0.0218
PHE 62TYR 63 -0.0668
TYR 63LEU 64 0.0882
LEU 64LEU 65 -0.1246
LEU 65TYR 66 0.1074
TYR 66TYR 67 -0.0718
TYR 67THR 68 -0.0416
THR 68GLU 69 -0.1546
GLU 69PHE 70 0.0595
PHE 70THR 71 0.0044
THR 71PRO 72 0.0604
PRO 72THR 73 -0.0595
THR 73GLU 74 0.0149
GLU 74LYS 75 0.0098
LYS 75ASN 76 -0.0182
ASN 76GLU 77 -0.0147
GLU 77TYR 78 0.0046
TYR 78ALA 79 0.0743
ALA 79CYS 80 0.0001
CYS 80ARG 81 0.0302
ARG 81VAL 82 0.0254
VAL 82ASN 83 0.0137
ASN 83HIS 84 -0.0075
HIS 84VAL 85 -0.0937
VAL 85THR 86 0.0590
THR 86LEU 87 -0.0230
LEU 87SER 88 0.0548
SER 88GLN 89 0.0176
GLN 89PRO 90 -0.0336
PRO 90LYS 91 -0.0219
LYS 91ILE 92 0.1383
ILE 92VAL 93 0.0053
VAL 93LYS 94 0.0591
LYS 94TRP 95 0.1663
TRP 95ASP 96 -0.0176

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.