CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171627183042169

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0797
ILE 1GLN 2 -0.0701
GLN 2ARG 3 -0.0767
ARG 3THR 4 -0.0012
THR 4PRO 5 -0.0449
PRO 5LYS 6 -0.0599
LYS 6ILE 7 -0.0023
ILE 7GLN 8 -0.0059
GLN 8VAL 9 0.0458
VAL 9TYR 10 0.0128
TYR 10SER 11 0.2112
SER 11ARG 12 -0.2248
ARG 12HIS 13 0.2741
HIS 13PRO 14 -0.2861
PRO 14ALA 15 0.2312
ALA 15GLU 16 0.0203
GLU 16ASN 17 0.1690
ASN 17GLY 18 0.0531
GLY 18LYS 19 0.1325
LYS 19SER 20 -0.1141
SER 20ASN 21 0.2358
ASN 21PHE 22 0.1125
PHE 22LEU 23 -0.2032
LEU 23ASN 24 0.1060
ASN 24CYS 25 0.0449
CYS 25TYR 26 0.1184
TYR 26VAL 27 0.1439
VAL 27SER 28 0.0433
SER 28GLY 29 -0.0101
GLY 29PHE 30 0.0234
PHE 30HIS 31 0.0357
HIS 31PRO 32 -0.1173
PRO 32SER 33 0.1658
SER 33ASP 34 -0.1353
ASP 34ILE 35 -0.0465
ILE 35GLU 36 -0.2147
GLU 36VAL 37 0.0804
VAL 37ASP 38 -0.1011
ASP 38LEU 39 -0.0033
LEU 39LEU 40 -0.0607
LEU 40LYS 41 -0.0791
LYS 41ASN 42 0.0684
ASN 42GLY 43 -0.1568
GLY 43GLU 44 0.0422
GLU 44ARG 45 -0.0400
ARG 45ILE 46 -0.1151
ILE 46GLU 47 0.1489
GLU 47LYS 48 -0.0701
LYS 48VAL 49 0.0169
VAL 49GLU 50 0.0207
GLU 50HIS 51 -0.0156
HIS 51SER 52 -0.0237
SER 52ASP 53 -0.0640
ASP 53LEU 54 0.2763
LEU 54SER 55 -0.0804
SER 55PHE 56 -0.0086
PHE 56SER 57 -0.0702
SER 57LYS 58 0.0075
LYS 58ASP 59 -0.0441
ASP 59TRP 60 0.0665
TRP 60SER 61 0.0085
SER 61PHE 62 0.0655
PHE 62TYR 63 0.1273
TYR 63LEU 64 -0.0206
LEU 64LEU 65 0.2419
LEU 65TYR 66 -0.0244
TYR 66TYR 67 0.0052
TYR 67THR 68 0.0320
THR 68GLU 69 -0.0198
GLU 69PHE 70 0.0971
PHE 70THR 71 0.3460
THR 71PRO 72 -0.0227
PRO 72THR 73 0.1149
THR 73GLU 74 0.1354
GLU 74LYS 75 -0.0808
LYS 75ASN 76 -0.0296
ASN 76GLU 77 -0.1870
GLU 77TYR 78 -0.1279
TYR 78ALA 79 -0.3310
ALA 79CYS 80 -0.1806
CYS 80ARG 81 -0.0315
ARG 81VAL 82 -0.1047
VAL 82ASN 83 -0.0067
ASN 83HIS 84 -0.1265
HIS 84VAL 85 0.0363
VAL 85THR 86 0.0159
THR 86LEU 87 -0.1333
LEU 87SER 88 0.0342
SER 88GLN 89 -0.0296
GLN 89PRO 90 -0.0525
PRO 90LYS 91 0.1078
LYS 91ILE 92 -0.3115
ILE 92VAL 93 0.0767
VAL 93LYS 94 -0.2533
LYS 94TRP 95 -0.1471
TRP 95ASP 96 0.0082

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.