CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171627183042169

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0065
ILE 1GLN 2 -0.0196
GLN 2ARG 3 -0.0004
ARG 3THR 4 0.0138
THR 4PRO 5 0.0064
PRO 5LYS 6 -0.0014
LYS 6ILE 7 0.0240
ILE 7GLN 8 0.0093
GLN 8VAL 9 0.0792
VAL 9TYR 10 -0.0237
TYR 10SER 11 -0.0865
SER 11ARG 12 0.0391
ARG 12HIS 13 0.1060
HIS 13PRO 14 0.0165
PRO 14ALA 15 0.1165
ALA 15GLU 16 -0.0392
GLU 16ASN 17 -0.0453
ASN 17GLY 18 -0.0055
GLY 18LYS 19 -0.1177
LYS 19SER 20 0.1059
SER 20ASN 21 -0.1835
ASN 21PHE 22 -0.0408
PHE 22LEU 23 0.1299
LEU 23ASN 24 0.0384
ASN 24CYS 25 0.0949
CYS 25TYR 26 0.0455
TYR 26VAL 27 0.1020
VAL 27SER 28 0.0042
SER 28GLY 29 0.0431
GLY 29PHE 30 0.0078
PHE 30HIS 31 0.0326
HIS 31PRO 32 -0.0240
PRO 32SER 33 0.0568
SER 33ASP 34 -0.0261
ASP 34ILE 35 -0.0404
ILE 35GLU 36 -0.1473
GLU 36VAL 37 0.0630
VAL 37ASP 38 -0.1140
ASP 38LEU 39 -0.0004
LEU 39LEU 40 0.0168
LEU 40LYS 41 -0.0899
LYS 41ASN 42 0.0275
ASN 42GLY 43 -0.1107
GLY 43GLU 44 0.0439
GLU 44ARG 45 -0.0406
ARG 45ILE 46 0.0037
ILE 46GLU 47 -0.0035
GLU 47LYS 48 0.0316
LYS 48VAL 49 -0.0432
VAL 49GLU 50 0.0757
GLU 50HIS 51 -0.0373
HIS 51SER 52 0.0695
SER 52ASP 53 -0.0506
ASP 53LEU 54 0.2033
LEU 54SER 55 -0.0232
SER 55PHE 56 0.0127
PHE 56SER 57 -0.0161
SER 57LYS 58 0.0056
LYS 58ASP 59 -0.0084
ASP 59TRP 60 0.0102
TRP 60SER 61 0.0243
SER 61PHE 62 0.0361
PHE 62TYR 63 0.0699
TYR 63LEU 64 -0.0045
LEU 64LEU 65 0.1638
LEU 65TYR 66 -0.0383
TYR 66TYR 67 0.1127
TYR 67THR 68 -0.0125
THR 68GLU 69 0.0018
GLU 69PHE 70 0.0868
PHE 70THR 71 -0.0156
THR 71PRO 72 0.0704
PRO 72THR 73 -0.0538
THR 73GLU 74 -0.0120
GLU 74LYS 75 0.0087
LYS 75ASN 76 -0.0007
ASN 76GLU 77 -0.0044
GLU 77TYR 78 0.0066
TYR 78ALA 79 -0.1300
ALA 79CYS 80 -0.0416
CYS 80ARG 81 -0.0250
ARG 81VAL 82 -0.0621
VAL 82ASN 83 -0.0103
ASN 83HIS 84 -0.0868
HIS 84VAL 85 -0.0161
VAL 85THR 86 0.0251
THR 86LEU 87 -0.0585
LEU 87SER 88 -0.0001
SER 88GLN 89 -0.0055
GLN 89PRO 90 -0.0022
PRO 90LYS 91 0.0273
LYS 91ILE 92 -0.1175
ILE 92VAL 93 0.0031
VAL 93LYS 94 -0.0626
LYS 94TRP 95 -0.1264
TRP 95ASP 96 0.0281

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.