CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171627183042169

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0290
ILE 1GLN 2 0.0222
GLN 2ARG 3 -0.0464
ARG 3THR 4 0.1024
THR 4PRO 5 -0.0223
PRO 5LYS 6 -0.1580
LYS 6ILE 7 0.1619
ILE 7GLN 8 -0.2661
GLN 8VAL 9 0.2457
VAL 9TYR 10 -0.3478
TYR 10SER 11 -0.0534
SER 11ARG 12 -0.2310
ARG 12HIS 13 -0.3976
HIS 13PRO 14 -0.0324
PRO 14ALA 15 0.2080
ALA 15GLU 16 -0.0286
GLU 16ASN 17 0.0626
ASN 17GLY 18 0.0293
GLY 18LYS 19 -0.0602
LYS 19SER 20 -0.1106
SER 20ASN 21 0.1381
ASN 21PHE 22 -0.0096
PHE 22LEU 23 0.0158
LEU 23ASN 24 -0.0101
ASN 24CYS 25 -0.0698
CYS 25TYR 26 0.0043
TYR 26VAL 27 -0.0465
VAL 27SER 28 0.0244
SER 28GLY 29 -0.0492
GLY 29PHE 30 -0.0021
PHE 30HIS 31 -0.0253
HIS 31PRO 32 -0.0320
PRO 32SER 33 0.0343
SER 33ASP 34 -0.0240
ASP 34ILE 35 -0.0242
ILE 35GLU 36 -0.0867
GLU 36VAL 37 0.0657
VAL 37ASP 38 -0.0838
ASP 38LEU 39 0.0301
LEU 39LEU 40 -0.0145
LEU 40LYS 41 0.0278
LYS 41ASN 42 -0.0654
ASN 42GLY 43 0.0356
GLY 43GLU 44 -0.0169
GLU 44ARG 45 -0.0564
ARG 45ILE 46 0.0956
ILE 46GLU 47 -0.0402
GLU 47LYS 48 0.1241
LYS 48VAL 49 -0.0867
VAL 49GLU 50 0.0448
GLU 50HIS 51 -0.0732
HIS 51SER 52 -0.0436
SER 52ASP 53 -0.1215
ASP 53LEU 54 -0.0973
LEU 54SER 55 -0.1217
SER 55PHE 56 -0.1395
PHE 56SER 57 -0.0647
SER 57LYS 58 -0.0297
LYS 58ASP 59 -0.0149
ASP 59TRP 60 0.0538
TRP 60SER 61 -0.0273
SER 61PHE 62 -0.0173
PHE 62TYR 63 -0.0200
TYR 63LEU 64 -0.1296
LEU 64LEU 65 -0.0719
LEU 65TYR 66 -0.0932
TYR 66TYR 67 -0.0320
TYR 67THR 68 -0.0410
THR 68GLU 69 -0.0413
GLU 69PHE 70 -0.0726
PHE 70THR 71 -0.2117
THR 71PRO 72 -0.0108
PRO 72THR 73 -0.0090
THR 73GLU 74 -0.0632
GLU 74LYS 75 -0.0005
LYS 75ASN 76 0.0175
ASN 76GLU 77 0.1045
GLU 77TYR 78 0.0785
TYR 78ALA 79 0.1632
ALA 79CYS 80 0.1057
CYS 80ARG 81 -0.0377
ARG 81VAL 82 0.0435
VAL 82ASN 83 -0.0171
ASN 83HIS 84 0.0578
HIS 84VAL 85 0.0561
VAL 85THR 86 -0.0615
THR 86LEU 87 0.1211
LEU 87SER 88 -0.0887
SER 88GLN 89 -0.0038
GLN 89PRO 90 0.0665
PRO 90LYS 91 -0.0448
LYS 91ILE 92 0.0501
ILE 92VAL 93 -0.0814
VAL 93LYS 94 0.1364
LYS 94TRP 95 -0.1006
TRP 95ASP 96 -0.0140

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.