CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

Normal Mode Analysis for ID 2604171627183042169

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1460
mode 8 1.12 0.2507
mode 9 1.31 0.4214
mode 10 1.36 0.1564
mode 11 1.57 0.3083
mode 12 1.79 0.2029
mode 13 1.86 0.4365
mode 14 2.03 0.1662
mode 15 2.17 0.1085
mode 16 2.28 0.0664
mode 17 2.33 0.1118
mode 18 2.42 0.4864
mode 19 2.49 0.1224
mode 20 2.60 0.2740
mode 21 2.66 0.1581
mode 22 2.73 0.3954
mode 23 2.76 0.2592
mode 24 2.83 0.2341
mode 25 2.88 0.2539
mode 26 2.98 0.2745
mode 27 3.08 0.2844
mode 28 3.14 0.3323
mode 29 3.20 0.2336
mode 30 3.24 0.2088
mode 31 3.30 0.0682
mode 32 3.36 0.1973
mode 33 3.46 0.1541
mode 34 3.53 0.3474
mode 35 3.59 0.2192
mode 36 3.69 0.4628
mode 37 3.70 0.3109
mode 38 3.85 0.1781
mode 39 3.86 0.3709
mode 40 3.97 0.2423
mode 41 4.04 0.0937
mode 42 4.08 0.4111
mode 43 4.15 0.1745
mode 44 4.23 0.3618
mode 45 4.29 0.3557
mode 46 4.32 0.3536
mode 47 4.36 0.4345
mode 48 4.40 0.4988
mode 49 4.44 0.3686
mode 50 4.49 0.3518
mode 51 4.57 0.4540
mode 52 4.58 0.2105
mode 53 4.66 0.2267
mode 54 4.70 0.4753
mode 55 4.75 0.4500
mode 56 4.76 0.0707
mode 57 4.82 0.2662
mode 58 4.87 0.3101
mode 59 4.87 0.3375
mode 60 4.95 0.3191
mode 61 4.98 0.4482
mode 62 5.02 0.3996
mode 63 5.16 0.3758
mode 64 5.18 0.2898
mode 65 5.19 0.4007
mode 66 5.28 0.3976
mode 67 5.42 0.3753
mode 68 5.44 0.3462
mode 69 5.47 0.3076
mode 70 5.49 0.3761
mode 71 5.51 0.4296
mode 72 5.53 0.5372
mode 73 5.62 0.4216
mode 74 5.68 0.0749
mode 75 5.70 0.3141
mode 76 5.70 0.3849
mode 77 5.74 0.3965
mode 78 5.77 0.4495
mode 79 5.81 0.1567
mode 80 5.82 0.4332
mode 81 5.84 0.4135
mode 82 5.87 0.1498
mode 83 5.90 0.4143
mode 84 5.92 0.4555
mode 85 5.99 0.4806
mode 86 6.03 0.1019
mode 87 6.07 0.2433
mode 88 6.13 0.3622
mode 89 6.16 0.4586
mode 90 6.17 0.3458
mode 91 6.19 0.4137
mode 92 6.21 0.2506
mode 93 6.26 0.2729
mode 94 6.31 0.4124
mode 95 6.33 0.1752
mode 96 6.37 0.2288
mode 97 6.41 0.4622
mode 98 6.43 0.4244
mode 99 6.44 0.3905
mode 100 6.45 0.4243
mode 101 6.48 0.3433
mode 102 6.51 0.4479
mode 103 6.54 0.3876
mode 104 6.56 0.4553
mode 105 6.62 0.3450
mode 106 6.65 0.1002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.