CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171641013049662

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0791
ILE 1GLN 2 -0.0697
GLN 2ARG 3 -0.0773
ARG 3THR 4 0.0034
THR 4PRO 5 -0.0454
PRO 5LYS 6 -0.0692
LYS 6ILE 7 0.0035
ILE 7GLN 8 -0.0138
GLN 8VAL 9 0.0489
VAL 9TYR 10 0.0092
TYR 10SER 11 0.2093
SER 11ARG 12 -0.2240
ARG 12HIS 13 0.2745
HIS 13PRO 14 -0.2869
PRO 14ALA 15 0.2269
ALA 15GLU 16 0.0206
GLU 16ASN 17 0.1686
ASN 17GLY 18 0.0529
GLY 18LYS 19 0.1338
LYS 19SER 20 -0.1142
SER 20ASN 21 0.2346
ASN 21PHE 22 0.1133
PHE 22LEU 23 -0.2039
LEU 23ASN 24 0.1069
ASN 24CYS 25 0.0469
CYS 25TYR 26 0.1179
TYR 26MET 27 0.1542
MET 27SER 28 0.0560
SER 28GLY 29 -0.0073
GLY 29PHE 30 0.0225
PHE 30HIS 31 0.0339
HIS 31PRO 32 -0.1166
PRO 32SER 33 0.1660
SER 33ASP 34 -0.1377
ASP 34ILE 35 -0.0484
ILE 35GLU 36 -0.2142
GLU 36VAL 37 0.0761
VAL 37ASP 38 -0.1042
ASP 38LEU 39 -0.0051
LEU 39LEU 40 -0.0600
LEU 40LYS 41 -0.0791
LYS 41ASN 42 0.0676
ASN 42GLY 43 -0.1558
GLY 43GLU 44 0.0426
GLU 44ARG 45 -0.0402
ARG 45ILE 46 -0.1144
ILE 46GLU 47 0.1495
GLU 47LYS 48 -0.0698
LYS 48VAL 49 0.0168
VAL 49GLU 50 0.0215
GLU 50HIS 51 -0.0161
HIS 51SER 52 -0.0226
SER 52ASP 53 -0.0646
ASP 53LEU 54 0.2753
LEU 54SER 55 -0.0815
SER 55PHE 56 -0.0064
PHE 56SER 57 -0.0703
SER 57LYS 58 0.0087
LYS 58ASP 59 -0.0444
ASP 59TRP 60 0.0677
TRP 60SER 61 0.0095
SER 61PHE 62 0.0643
PHE 62TYR 63 0.1303
TYR 63LEU 64 -0.0162
LEU 64LEU 65 0.2414
LEU 65TYR 66 -0.0264
TYR 66TYR 67 0.0069
TYR 67THR 68 0.0334
THR 68GLU 69 -0.0190
GLU 69PHE 70 0.0970
PHE 70THR 71 0.3487
THR 71PRO 72 -0.0246
PRO 72THR 73 0.1152
THR 73GLU 74 0.1343
GLU 74LYS 75 -0.0832
LYS 75ASP 76 -0.0279
ASP 76GLU 77 -0.1874
GLU 77TYR 78 -0.1291
TYR 78ALA 79 -0.3329
ALA 79CYS 80 -0.1840
CYS 80ARG 81 -0.0311
ARG 81VAL 82 -0.1022
VAL 82ASN 83 -0.0182
ASN 83HIS 84 -0.1310
HIS 84VAL 85 0.0430
VAL 85THR 86 0.0139
THR 86LEU 87 -0.1337
LEU 87SER 88 0.0328
SER 88GLN 89 -0.0304
GLN 89PRO 90 -0.0511
PRO 90LYS 91 0.1071
LYS 91ILE 92 -0.3103
ILE 92VAL 93 0.0770
VAL 93LYS 94 -0.2536
LYS 94TRP 95 -0.1504
TRP 95ASP 96 0.0078

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.