CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171641013049662

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0065
ILE 1GLN 2 -0.0187
GLN 2ARG 3 -0.0008
ARG 3THR 4 0.0147
THR 4PRO 5 0.0042
PRO 5LYS 6 -0.0023
LYS 6ILE 7 0.0265
ILE 7GLN 8 0.0077
GLN 8VAL 9 0.0788
VAL 9TYR 10 -0.0242
TYR 10SER 11 -0.0868
SER 11ARG 12 0.0390
ARG 12HIS 13 0.1063
HIS 13PRO 14 0.0164
PRO 14ALA 15 0.1161
ALA 15GLU 16 -0.0393
GLU 16ASN 17 -0.0446
ASN 17GLY 18 -0.0051
GLY 18LYS 19 -0.1187
LYS 19SER 20 0.1058
SER 20ASN 21 -0.1838
ASN 21PHE 22 -0.0408
PHE 22LEU 23 0.1300
LEU 23ASN 24 0.0383
ASN 24CYS 25 0.0978
CYS 25TYR 26 0.0441
TYR 26MET 27 0.1072
MET 27SER 28 0.0120
SER 28GLY 29 0.0441
GLY 29PHE 30 0.0072
PHE 30HIS 31 0.0311
HIS 31PRO 32 -0.0230
PRO 32SER 33 0.0556
SER 33ASP 34 -0.0270
ASP 34ILE 35 -0.0414
ILE 35GLU 36 -0.1445
GLU 36VAL 37 0.0618
VAL 37ASP 38 -0.1155
ASP 38LEU 39 -0.0016
LEU 39LEU 40 0.0168
LEU 40LYS 41 -0.0893
LYS 41ASN 42 0.0279
ASN 42GLY 43 -0.1105
GLY 43GLU 44 0.0441
GLU 44ARG 45 -0.0408
ARG 45ILE 46 0.0038
ILE 46GLU 47 -0.0034
GLU 47LYS 48 0.0323
LYS 48VAL 49 -0.0434
VAL 49GLU 50 0.0755
GLU 50HIS 51 -0.0373
HIS 51SER 52 0.0704
SER 52ASP 53 -0.0502
ASP 53LEU 54 0.2010
LEU 54SER 55 -0.0231
SER 55PHE 56 0.0137
PHE 56SER 57 -0.0152
SER 57LYS 58 0.0067
LYS 58ASP 59 -0.0098
ASP 59TRP 60 0.0107
TRP 60SER 61 0.0246
SER 61PHE 62 0.0348
PHE 62TYR 63 0.0709
TYR 63LEU 64 -0.0020
LEU 64LEU 65 0.1637
LEU 65TYR 66 -0.0388
TYR 66TYR 67 0.1126
TYR 67THR 68 -0.0129
THR 68GLU 69 0.0025
GLU 69PHE 70 0.0868
PHE 70THR 71 -0.0153
THR 71PRO 72 0.0704
PRO 72THR 73 -0.0538
THR 73GLU 74 -0.0117
GLU 74LYS 75 0.0092
LYS 75ASP 76 0.0001
ASP 76GLU 77 -0.0045
GLU 77TYR 78 0.0068
TYR 78ALA 79 -0.1299
ALA 79CYS 80 -0.0425
CYS 80ARG 81 -0.0254
ARG 81VAL 82 -0.0598
VAL 82ASN 83 -0.0155
ASN 83HIS 84 -0.0891
HIS 84VAL 85 -0.0115
VAL 85THR 86 0.0234
THR 86LEU 87 -0.0582
LEU 87SER 88 0.0001
SER 88GLN 89 -0.0060
GLN 89PRO 90 -0.0020
PRO 90LYS 91 0.0269
LYS 91ILE 92 -0.1165
ILE 92VAL 93 0.0035
VAL 93LYS 94 -0.0619
LYS 94TRP 95 -0.1264
TRP 95ASP 96 0.0283

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.