CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

Normal Mode Analysis for ID 2604171641013049662

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1448
mode 8 1.12 0.2504
mode 9 1.31 0.4197
mode 10 1.36 0.1547
mode 11 1.57 0.3106
mode 12 1.78 0.2011
mode 13 1.86 0.4373
mode 14 2.03 0.1656
mode 15 2.17 0.1086
mode 16 2.27 0.0658
mode 17 2.33 0.1128
mode 18 2.43 0.4789
mode 19 2.48 0.1216
mode 20 2.59 0.2678
mode 21 2.65 0.1533
mode 22 2.73 0.3980
mode 23 2.76 0.2554
mode 24 2.82 0.2354
mode 25 2.88 0.2532
mode 26 2.98 0.2738
mode 27 3.08 0.2772
mode 28 3.14 0.3285
mode 29 3.20 0.2374
mode 30 3.24 0.2084
mode 31 3.30 0.0694
mode 32 3.36 0.1998
mode 33 3.46 0.1510
mode 34 3.53 0.3450
mode 35 3.59 0.2187
mode 36 3.70 0.3967
mode 37 3.70 0.3238
mode 38 3.84 0.1770
mode 39 3.87 0.3673
mode 40 3.97 0.2420
mode 41 4.04 0.0872
mode 42 4.09 0.3983
mode 43 4.15 0.1817
mode 44 4.23 0.3542
mode 45 4.29 0.3655
mode 46 4.32 0.3518
mode 47 4.36 0.4197
mode 48 4.42 0.4820
mode 49 4.45 0.3631
mode 50 4.49 0.3510
mode 51 4.57 0.4102
mode 52 4.59 0.2191
mode 53 4.66 0.2324
mode 54 4.70 0.4949
mode 55 4.75 0.1873
mode 56 4.76 0.2176
mode 57 4.82 0.2419
mode 58 4.87 0.3627
mode 59 4.87 0.3117
mode 60 4.96 0.3193
mode 61 4.99 0.4466
mode 62 5.02 0.4042
mode 63 5.17 0.3402
mode 64 5.20 0.2134
mode 65 5.20 0.3763
mode 66 5.28 0.4105
mode 67 5.42 0.3789
mode 68 5.44 0.3264
mode 69 5.47 0.2971
mode 70 5.49 0.3295
mode 71 5.53 0.5713
mode 72 5.55 0.4186
mode 73 5.64 0.4251
mode 74 5.67 0.0504
mode 75 5.70 0.3090
mode 76 5.71 0.4116
mode 77 5.74 0.3922
mode 78 5.79 0.4827
mode 79 5.81 0.1219
mode 80 5.82 0.5073
mode 81 5.84 0.3758
mode 82 5.87 0.1703
mode 83 5.90 0.4505
mode 84 5.93 0.4194
mode 85 5.99 0.4871
mode 86 6.03 0.0893
mode 87 6.07 0.2656
mode 88 6.13 0.3663
mode 89 6.16 0.4751
mode 90 6.17 0.3380
mode 91 6.20 0.4274
mode 92 6.23 0.2996
mode 93 6.27 0.2458
mode 94 6.31 0.4010
mode 95 6.33 0.1745
mode 96 6.37 0.2469
mode 97 6.42 0.4667
mode 98 6.43 0.3914
mode 99 6.44 0.3086
mode 100 6.45 0.4330
mode 101 6.48 0.3539
mode 102 6.52 0.4577
mode 103 6.54 0.3888
mode 104 6.57 0.4604
mode 105 6.61 0.3426
mode 106 6.65 0.1129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.