CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171651193055328

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0807
ILE 1GLN 2 -0.0265
GLN 2ARG 3 -0.0691
ARG 3THR 4 0.0319
THR 4PRO 5 -0.0348
PRO 5LYS 6 -0.1290
LYS 6ILE 7 0.0697
ILE 7GLN 8 -0.1549
GLN 8VAL 9 0.1083
VAL 9CYS 10 -0.1422
CYS 10SER 11 -0.1959
SER 11ARG 12 0.1639
ARG 12HIS 13 -0.0649
HIS 13PRO 14 0.1050
PRO 14ALA 15 -0.1951
ALA 15GLU 16 0.0375
GLU 16ASN 17 0.0066
ASN 17GLY 18 -0.0495
GLY 18LYS 19 0.0701
LYS 19SER 20 0.0583
SER 20ASN 21 -0.1973
ASN 21PHE 22 0.0838
PHE 22LEU 23 -0.0782
LEU 23ASN 24 0.0438
ASN 24CYS 25 -0.0484
CYS 25TYR 26 0.0634
TYR 26VAL 27 0.0295
VAL 27SER 28 0.0302
SER 28GLY 29 -0.0610
GLY 29PHE 30 0.0057
PHE 30HIS 31 0.0011
HIS 31PRO 32 -0.0835
PRO 32SER 33 0.1140
SER 33ASP 34 -0.0815
ASP 34ILE 35 -0.0108
ILE 35GLU 36 -0.1357
GLU 36VAL 37 0.1040
VAL 37ASP 38 -0.1025
ASP 38LEU 39 0.0362
LEU 39LEU 40 -0.0489
LEU 40LYS 41 -0.0646
LYS 41ASN 42 -0.0199
ASN 42GLY 43 -0.1128
GLY 43GLU 44 0.0181
GLU 44ARG 45 -0.0688
ARG 45ILE 46 -0.0151
ILE 46GLU 47 0.0631
GLU 47LYS 48 0.0517
LYS 48VAL 49 -0.0412
VAL 49GLU 50 0.0117
GLU 50HIS 51 -0.0020
HIS 51SER 52 0.0616
SER 52ASP 53 -0.1137
ASP 53LEU 54 0.2386
LEU 54SER 55 -0.0865
SER 55PHE 56 -0.0577
PHE 56SER 57 -0.0644
SER 57LYS 58 -0.0185
LYS 58ASP 59 -0.0311
ASP 59TRP 60 0.0525
TRP 60SER 61 -0.0188
SER 61PHE 62 0.0274
PHE 62TYR 63 0.0641
TYR 63LEU 64 -0.0672
LEU 64LEU 65 0.1306
LEU 65TYR 66 -0.1016
TYR 66TYR 67 0.0642
TYR 67THR 68 0.0473
THR 68GLU 69 0.1500
GLU 69PHE 70 -0.0603
PHE 70THR 71 0.0025
THR 71PRO 72 -0.0626
PRO 72THR 73 0.0649
THR 73GLU 74 -0.0151
GLU 74LYS 75 -0.0094
LYS 75ASP 76 0.0158
ASP 76GLU 77 0.0142
GLU 77TYR 78 -0.0018
TYR 78ALA 79 -0.0810
ALA 79CYS 80 0.0016
CYS 80ARG 81 -0.0346
ARG 81VAL 82 -0.0317
VAL 82ASN 83 -0.0136
ASN 83HIS 84 -0.0175
HIS 84VAL 85 0.0724
VAL 85THR 86 -0.0410
THR 86LEU 87 0.0013
LEU 87SER 88 -0.0459
SER 88GLN 89 -0.0176
GLN 89PRO 90 0.0264
PRO 90LYS 91 0.0304
LYS 91ILE 92 -0.1446
ILE 92VAL 93 0.0008
VAL 93LYS 94 -0.0524
LYS 94TRP 95 -0.1732
TRP 95ASP 96 0.0187

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.