CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171651193055328

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 -0.0181
ILE 1GLN 2 0.0190
GLN 2ARG 3 -0.0074
ARG 3THR 4 -0.0199
THR 4PRO 5 -0.0118
PRO 5LYS 6 -0.0203
LYS 6ILE 7 -0.0318
ILE 7GLN 8 -0.0641
GLN 8VAL 9 -0.1059
VAL 9CYS 10 -0.0368
CYS 10SER 11 -0.0139
SER 11ARG 12 -0.0568
ARG 12HIS 13 -0.1257
HIS 13PRO 14 -0.0145
PRO 14ALA 15 -0.1136
ALA 15GLU 16 0.0386
GLU 16ASN 17 0.0494
ASN 17GLY 18 0.0053
GLY 18LYS 19 0.1047
LYS 19SER 20 -0.1039
SER 20ASN 21 0.1671
ASN 21PHE 22 0.0190
PHE 22LEU 23 -0.1231
LEU 23ASN 24 -0.0818
ASN 24CYS 25 -0.1493
CYS 25TYR 26 -0.0978
TYR 26VAL 27 -0.1066
VAL 27SER 28 -0.0093
SER 28GLY 29 -0.0558
GLY 29PHE 30 -0.0039
PHE 30HIS 31 -0.0376
HIS 31PRO 32 0.0188
PRO 32SER 33 -0.0549
SER 33ASP 34 0.0234
ASP 34ILE 35 0.0485
ILE 35GLU 36 0.1660
GLU 36VAL 37 -0.0617
VAL 37ASP 38 0.1261
ASP 38LEU 39 0.0046
LEU 39LEU 40 -0.0188
LEU 40LYS 41 0.1010
LYS 41ASN 42 -0.0374
ASN 42GLY 43 0.1268
GLY 43GLU 44 -0.0510
GLU 44ARG 45 0.0433
ARG 45ILE 46 0.0103
ILE 46GLU 47 -0.0006
GLU 47LYS 48 -0.0124
LYS 48VAL 49 0.0331
VAL 49GLU 50 -0.0778
GLU 50HIS 51 0.0408
HIS 51SER 52 -0.0516
SER 52ASP 53 0.0448
ASP 53LEU 54 -0.2078
LEU 54SER 55 0.0201
SER 55PHE 56 -0.0216
PHE 56SER 57 0.0114
SER 57LYS 58 -0.0095
LYS 58ASP 59 0.0097
ASP 59TRP 60 -0.0088
TRP 60SER 61 -0.0272
SER 61PHE 62 -0.0393
PHE 62TYR 63 -0.0656
TYR 63LEU 64 -0.0122
LEU 64LEU 65 -0.1962
LEU 65TYR 66 0.0318
TYR 66TYR 67 -0.1163
TYR 67THR 68 0.0011
THR 68GLU 69 -0.0029
GLU 69PHE 70 -0.0885
PHE 70THR 71 -0.0073
THR 71PRO 72 -0.0806
PRO 72THR 73 0.0507
THR 73GLU 74 0.0072
GLU 74LYS 75 -0.0077
LYS 75ASP 76 0.0019
ASP 76GLU 77 0.0065
GLU 77TYR 78 -0.0075
TYR 78ALA 79 0.1401
ALA 79CYS 80 0.0440
CYS 80ARG 81 0.0153
ARG 81VAL 82 0.0663
VAL 82ASN 83 0.0075
ASN 83HIS 84 0.1042
HIS 84VAL 85 0.0283
VAL 85THR 86 -0.0349
THR 86LEU 87 0.0660
LEU 87SER 88 -0.0084
SER 88GLN 89 0.0043
GLN 89PRO 90 0.0094
PRO 90LYS 91 -0.0318
LYS 91ILE 92 0.1148
ILE 92VAL 93 -0.0139
VAL 93LYS 94 0.0606
LYS 94TRP 95 0.1096
TRP 95ASP 96 -0.0216

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.