CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171651193055328

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0407
ILE 1GLN 2 -0.0153
GLN 2ARG 3 0.0502
ARG 3THR 4 -0.0871
THR 4PRO 5 0.0260
PRO 5LYS 6 0.1351
LYS 6ILE 7 -0.1425
ILE 7GLN 8 0.2406
GLN 8VAL 9 -0.1889
VAL 9CYS 10 0.3817
CYS 10SER 11 0.2070
SER 11ARG 12 0.2212
ARG 12HIS 13 0.3472
HIS 13PRO 14 0.0246
PRO 14ALA 15 -0.1896
ALA 15GLU 16 0.0342
GLU 16ASN 17 -0.0506
ASN 17GLY 18 -0.0243
GLY 18LYS 19 0.0708
LYS 19SER 20 0.0682
SER 20ASN 21 -0.0984
ASN 21PHE 22 0.0204
PHE 22LEU 23 -0.0080
LEU 23ASN 24 0.0151
ASN 24CYS 25 0.1286
CYS 25TYR 26 0.0064
TYR 26VAL 27 0.0256
VAL 27SER 28 -0.0187
SER 28GLY 29 0.0572
GLY 29PHE 30 0.0013
PHE 30HIS 31 0.0226
HIS 31PRO 32 0.0369
PRO 32SER 33 -0.0403
SER 33ASP 34 0.0325
ASP 34ILE 35 0.0139
ILE 35GLU 36 0.0817
GLU 36VAL 37 -0.0726
VAL 37ASP 38 0.0793
ASP 38LEU 39 -0.0319
LEU 39LEU 40 0.0089
LEU 40LYS 41 -0.0262
LYS 41ASN 42 0.0611
ASN 42GLY 43 -0.0314
GLY 43GLU 44 0.0179
GLU 44ARG 45 0.0572
ARG 45ILE 46 -0.0970
ILE 46GLU 47 0.0406
GLU 47LYS 48 -0.1334
LYS 48VAL 49 0.0932
VAL 49GLU 50 -0.0466
GLU 50HIS 51 0.0752
HIS 51SER 52 0.0042
SER 52ASP 53 0.1279
ASP 53LEU 54 0.0332
LEU 54SER 55 0.1091
SER 55PHE 56 0.1263
PHE 56SER 57 0.0600
SER 57LYS 58 0.0301
LYS 58ASP 59 0.0165
ASP 59TRP 60 -0.0482
TRP 60SER 61 0.0282
SER 61PHE 62 0.0132
PHE 62TYR 63 0.0125
TYR 63LEU 64 0.1251
LEU 64LEU 65 0.0732
LEU 65TYR 66 0.1106
TYR 66TYR 67 0.0254
TYR 67THR 68 0.0424
THR 68GLU 69 0.0341
GLU 69PHE 70 0.0640
PHE 70THR 71 0.2041
THR 71PRO 72 0.0208
PRO 72THR 73 0.0075
THR 73GLU 74 0.0587
GLU 74LYS 75 0.0008
LYS 75ASP 76 -0.0135
ASP 76GLU 77 -0.0974
GLU 77TYR 78 -0.0769
TYR 78ALA 79 -0.1401
ALA 79CYS 80 -0.1001
CYS 80ARG 81 0.0444
ARG 81VAL 82 -0.0340
VAL 82ASN 83 0.0164
ASN 83HIS 84 -0.0540
HIS 84VAL 85 -0.0616
VAL 85THR 86 0.0577
THR 86LEU 87 -0.1003
LEU 87SER 88 0.0795
SER 88GLN 89 0.0075
GLN 89PRO 90 -0.0600
PRO 90LYS 91 0.0297
LYS 91ILE 92 -0.0116
ILE 92VAL 93 0.0701
VAL 93LYS 94 -0.1141
LYS 94TRP 95 0.1447
TRP 95ASP 96 0.0011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.