CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

CA strain for 2604171651193055328

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ILE 1 0.0968
ILE 1GLN 2 0.0240
GLN 2ARG 3 0.0938
ARG 3THR 4 0.1908
THR 4PRO 5 0.0722
PRO 5LYS 6 0.1402
LYS 6ILE 7 0.2609
ILE 7GLN 8 0.1591
GLN 8VAL 9 0.4185
VAL 9CYS 10 -0.0024
CYS 10SER 11 0.3512
SER 11ARG 12 -0.0432
ARG 12HIS 13 0.1414
HIS 13PRO 14 -0.0989
PRO 14ALA 15 -0.1209
ALA 15GLU 16 0.0360
GLU 16ASN 17 0.0586
ASN 17GLY 18 0.0189
GLY 18LYS 19 0.1453
LYS 19SER 20 -0.1034
SER 20ASN 21 0.1027
ASN 21PHE 22 0.0360
PHE 22LEU 23 -0.0715
LEU 23ASN 24 0.1408
ASN 24CYS 25 0.0763
CYS 25TYR 26 0.2100
TYR 26VAL 27 0.1757
VAL 27SER 28 0.0365
SER 28GLY 29 0.2598
GLY 29PHE 30 -0.0051
PHE 30HIS 31 0.0674
HIS 31PRO 32 0.0804
PRO 32SER 33 -0.0344
SER 33ASP 34 0.0613
ASP 34ILE 35 -0.2064
ILE 35GLU 36 -0.3938
GLU 36VAL 37 -0.0300
VAL 37ASP 38 -0.2740
ASP 38LEU 39 -0.1061
LEU 39LEU 40 -0.0132
LEU 40LYS 41 -0.1253
LYS 41ASN 42 -0.0094
ASN 42GLY 43 -0.1088
GLY 43GLU 44 0.0592
GLU 44ARG 45 -0.1053
ARG 45ILE 46 -0.0209
ILE 46GLU 47 0.0195
GLU 47LYS 48 -0.0356
LYS 48VAL 49 -0.0161
VAL 49GLU 50 0.0531
GLU 50HIS 51 -0.0731
HIS 51SER 52 -0.2299
SER 52ASP 53 0.0270
ASP 53LEU 54 -0.3384
LEU 54SER 55 -0.0872
SER 55PHE 56 -0.0418
PHE 56SER 57 -0.0130
SER 57LYS 58 0.0323
LYS 58ASP 59 0.0121
ASP 59TRP 60 0.0421
TRP 60SER 61 0.0704
SER 61PHE 62 0.0344
PHE 62TYR 63 -0.0007
TYR 63LEU 64 0.0317
LEU 64LEU 65 0.0566
LEU 65TYR 66 0.0274
TYR 66TYR 67 -0.0696
TYR 67THR 68 -0.0083
THR 68GLU 69 -0.0875
GLU 69PHE 70 -0.0962
PHE 70THR 71 -0.1146
THR 71PRO 72 0.0600
PRO 72THR 73 0.0191
THR 73GLU 74 -0.0801
GLU 74LYS 75 0.0044
LYS 75ASP 76 0.0096
ASP 76GLU 77 0.1121
GLU 77TYR 78 0.0935
TYR 78ALA 79 0.0807
ALA 79CYS 80 0.0704
CYS 80ARG 81 -0.0321
ARG 81VAL 82 -0.0257
VAL 82ASN 83 -0.0198
ASN 83HIS 84 -0.2202
HIS 84VAL 85 -0.1980
VAL 85THR 86 0.1104
THR 86LEU 87 -0.0173
LEU 87SER 88 -0.0356
SER 88GLN 89 0.0205
GLN 89PRO 90 0.0142
PRO 90LYS 91 -0.0290
LYS 91ILE 92 0.1290
ILE 92VAL 93 -0.0588
VAL 93LYS 94 0.2230
LYS 94TRP 95 0.0117
TRP 95ASP 96 -0.0377

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.