CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 09-APR-02 1LDS  ***

Normal Mode Analysis for ID 2604171651193055328

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1658
mode 8 1.12 0.2754
mode 9 1.31 0.4450
mode 10 1.39 0.1450
mode 11 1.58 0.3109
mode 12 1.82 0.2111
mode 13 1.90 0.4497
mode 14 2.08 0.1692
mode 15 2.21 0.1245
mode 16 2.32 0.0531
mode 17 2.36 0.1461
mode 18 2.46 0.4573
mode 19 2.54 0.1248
mode 20 2.65 0.3161
mode 21 2.69 0.3665
mode 22 2.74 0.1649
mode 23 2.82 0.2702
mode 24 2.89 0.2329
mode 25 2.94 0.2218
mode 26 3.03 0.2963
mode 27 3.13 0.2855
mode 28 3.20 0.3675
mode 29 3.25 0.2289
mode 30 3.30 0.2128
mode 31 3.37 0.0765
mode 32 3.42 0.2033
mode 33 3.47 0.1164
mode 34 3.54 0.1547
mode 35 3.64 0.2655
mode 36 3.72 0.2749
mode 37 3.77 0.4676
mode 38 3.83 0.3769
mode 39 3.94 0.4298
mode 40 3.98 0.1124
mode 41 4.11 0.1148
mode 42 4.13 0.4870
mode 43 4.21 0.1743
mode 44 4.30 0.4141
mode 45 4.37 0.4618
mode 46 4.40 0.3421
mode 47 4.41 0.3026
mode 48 4.49 0.5256
mode 49 4.54 0.3833
mode 50 4.57 0.3336
mode 51 4.67 0.4035
mode 52 4.69 0.2376
mode 53 4.74 0.1969
mode 54 4.79 0.5959
mode 55 4.85 0.4421
mode 56 4.86 0.0944
mode 57 4.89 0.2764
mode 58 4.96 0.0769
mode 59 4.97 0.3403
mode 60 5.02 0.3155
mode 61 5.07 0.4482
mode 62 5.11 0.4121
mode 63 5.27 0.3506
mode 64 5.29 0.3373
mode 65 5.30 0.3416
mode 66 5.38 0.4239
mode 67 5.49 0.4519
mode 68 5.53 0.2844
mode 69 5.56 0.3490
mode 70 5.59 0.2902
mode 71 5.62 0.4014
mode 72 5.66 0.5286
mode 73 5.72 0.4007
mode 74 5.80 0.1558
mode 75 5.81 0.3863
mode 76 5.82 0.2906
mode 77 5.84 0.3125
mode 78 5.87 0.3756
mode 79 5.93 0.1011
mode 80 5.94 0.4637
mode 81 5.95 0.3442
mode 82 5.98 0.2988
mode 83 6.00 0.4386
mode 84 6.04 0.3510
mode 85 6.11 0.4769
mode 86 6.12 0.3896
mode 87 6.19 0.0504
mode 88 6.25 0.3629
mode 89 6.28 0.4992
mode 90 6.30 0.3820
mode 91 6.32 0.4671
mode 92 6.35 0.2411
mode 93 6.39 0.3750
mode 94 6.44 0.3591
mode 95 6.47 0.1634
mode 96 6.51 0.3611
mode 97 6.53 0.4104
mode 98 6.56 0.3744
mode 99 6.56 0.3872
mode 100 6.58 0.3872
mode 101 6.62 0.2920
mode 102 6.65 0.3664
mode 103 6.69 0.4217
mode 104 6.69 0.4086
mode 105 6.73 0.3897
mode 106 6.79 0.4106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.