CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSCRIPTION 01-DEC-01 1KHX  ***

<R2> analysis for 2604171658123059867

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0727
PRO 2650.0387
VAL 2660.0246
THR 2670.0195
TYR 2680.0176
SER 2690.0049
GLU 2700.0310
PRO 2710.0431
ALA 2720.0487
PHE 2730.0091
TRP 2740.0066
CYS 2750.0103
SER 2760.0129
ILE 2770.0161
ALA 2780.0149
TYR 2790.0171
TYR 2800.0161
GLU 2810.0163
LEU 2820.0181
ASN 2830.0197
GLN 2840.0183
ARG 2850.0186
VAL 2860.0182
GLY 2870.0222
GLU 2880.0187
THR 2890.0203
PHE 2900.0207
HIS 2910.0164
ALA 2920.0114
SER 2930.0083
GLN 2940.0168
PRO 2950.0188
SER 2960.0211
LEU 2970.0175
THR 2980.0218
VAL 2990.0225
ASP 3000.0211
GLY 3010.0187
PHE 3020.0197
THR 3030.0276
ASP 3040.0354
PRO 3050.0542
SER 3060.0511
ASN 3070.0438
SER 3080.0330
GLU 3090.0298
ARG 3100.0330
PHE 3110.0277
CYS 3120.0265
LEU 3130.0203
GLY 3140.0181
LEU 3150.0233
LEU 3160.0214
SER 3170.0195
ASN 3180.0156
VAL 3190.0235
ASN 3200.0213
ARG 3210.0148
ASN 3220.0139
ALA 3230.0139
THR 3240.0156
VAL 3250.0146
GLU 3260.0109
MET 3270.0109
THR 3280.0123
ARG 3290.0118
ARG 3300.0091
HIS 3310.0081
ILE 3320.0108
GLY 3330.0132
ARG 3340.0115
GLY 3350.0126
VAL 3360.0134
ARG 3370.0173
LEU 3380.0192
TYR 3390.0258
TYR 3400.0289
ILE 3410.0376
GLY 3420.0353
GLY 3430.0315
GLU 3440.0340
VAL 3450.0325
PHE 3460.0340
ALA 3470.0233
GLU 3480.0194
CYS 3490.0083
LEU 3500.0070
SER 3510.0058
ASP 3520.0062
SER 3530.0054
ALA 3540.0030
ILE 3550.0083
PHE 3560.0117
VAL 3570.0239
GLN 3580.0281
SER 3590.0377
PRO 3600.0390
ASN 3610.0313
CYS 3620.0344
ASN 3630.0407
GLN 3640.0351
ARG 3650.0319
TYR 3660.0481
GLY 3670.0441
TRP 3680.0572
HIS 3690.0704
PRO 3700.0727
ALA 3710.0619
THR 3720.0481
VAL 3730.0277
CYS 3740.0259
LYS 3750.0129
ILE 3760.0084
PRO 3770.0057
PRO 3780.0044
GLY 3790.0072
CYS 3800.0098
ASN 3810.0262
LEU 3820.0243
LYS 3830.0325
ILE 3840.0319
PHE 3850.0317
ASN 3860.0255
ASN 3870.0209
GLN 3880.0153
GLU 3890.0129
PHE 3900.0114
ALA 3910.0172
ALA 3920.0226
LEU 3930.0118
LEU 3940.0132
ALA 3950.0298
GLN 3960.0317
SER 3970.0159
VAL 3980.0081
ASN 3990.0094
GLN 4000.0205
GLY 4010.0091
PHE 4020.0104
GLU 4030.0130
ALA 4040.0181
VAL 4050.0124
TYR 4060.0229
GLN 4070.0178
LEU 4080.0092
THR 4090.0143
ARG 4100.0131
MET 4110.0133
CYS 4120.0132
THR 4130.0143
ILE 4140.0178
ARG 4150.0084
MET 4160.0087
SER 4170.0122
PHE 4180.0096
VAL 4190.0110
LYS 4200.0123
GLY 4210.0149
TRP 4220.0164
GLY 4230.0208
ALA 4240.0178
GLU 4250.0218
TYR 4260.0203
ARG 4270.0216
ARG 4280.0194
GLN 4290.0177
THR 4300.0160
VAL 4310.0131
THR 4320.0156
SER 4330.0165
THR 4340.0166
PRO 4350.0139
CYS 4360.0137
TRP 4370.0119
ILE 4380.0116
GLU 4390.0065
LEU 4400.0044
HIS 4410.0113
LEU 4420.0112
ASN 4430.0100
GLY 4440.0102
PRO 4450.0124
LEU 4460.0104
GLN 4470.0083
TRP 4480.0121
LEU 4490.0100
ASP 4500.0165
LYS 4510.0191
VAL 4520.0198
LEU 4530.0212
THR 4540.0369
GLN 4550.0307
MET 4560.0063
GLY 4570.0304
SER 4580.0446
PRO 4590.0402
SER 4600.0283
VAL 4610.0352
ARG 4620.0267
CYS 4630.0126
SER 4640.0104
MET 4660.0024

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.