CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSCRIPTION 01-DEC-01 1KHX  ***

<R2> analysis for 2604171708293065687

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0878
PRO 2650.0230
VAL 2660.0471
THR 2670.0192
TYR 2680.0425
SER 2690.0292
GLU 2700.0345
PRO 2710.0462
ALA 2720.0370
PHE 2730.0334
TRP 2740.0259
CYS 2750.0133
SER 2760.0081
ILE 2770.0093
ALA 2780.0090
TYR 2790.0161
TYR 2800.0144
GLU 2810.0168
LEU 2820.0221
ASN 2830.0229
GLN 2840.0301
ARG 2850.0161
VAL 2860.0165
GLY 2870.0181
GLU 2880.0280
THR 2890.0270
PHE 2900.0241
HIS 2910.0142
ALA 2920.0255
SER 2930.0186
GLN 2940.0096
PRO 2950.0079
SER 2960.0115
LEU 2970.0086
THR 2980.0049
VAL 2990.0063
ASP 3000.0087
GLY 3010.0152
PHE 3020.0136
THR 3030.0154
ASP 3040.0192
LEU 3050.0217
SER 3060.0194
ASN 3070.0077
SER 3080.0167
GLU 3090.0159
ARG 3100.0104
PHE 3110.0090
CYS 3120.0062
LEU 3130.0037
GLY 3140.0082
LEU 3150.0049
LEU 3160.0110
SER 3170.0576
ASN 3180.0197
VAL 3190.0209
ASN 3200.0208
ARG 3210.0185
ASN 3220.0239
ALA 3230.0281
THR 3240.0120
VAL 3250.0086
GLU 3260.0110
MET 3270.0114
THR 3280.0093
ARG 3290.0186
ARG 3300.0323
HIS 3310.0150
ILE 3320.0125
GLY 3330.0159
ARG 3340.0106
GLY 3350.0052
VAL 3360.0072
ARG 3370.0141
LEU 3380.0116
TYR 3390.0098
TYR 3400.0087
ILE 3410.0152
GLY 3420.0190
GLY 3430.0134
GLU 3440.0117
VAL 3450.0039
PHE 3460.0040
ALA 3470.0081
GLU 3480.0096
CYS 3490.0083
LEU 3500.0107
SER 3510.0061
ASP 3520.0055
SER 3530.0082
ALA 3540.0057
ILE 3550.0075
PHE 3560.0078
VAL 3570.0061
GLN 3580.0063
SER 3590.0106
PRO 3600.0113
ASN 3610.0166
CYS 3620.0121
ASN 3630.0188
GLN 3640.0136
ARG 3650.0157
TYR 3660.0134
GLY 3670.0148
TRP 3680.0235
HIS 3690.0098
PRO 3700.0229
ALA 3710.0198
THR 3720.0221
VAL 3730.0112
CYS 3740.0131
LYS 3750.0201
ILE 3760.0150
PRO 3770.0163
PRO 3780.0183
GLY 3790.0168
CYS 3800.0075
ASN 3810.0098
LEU 3820.0158
LYS 3830.0054
ILE 3840.0058
PHE 3850.0092
ASN 3860.0086
ASN 3870.0158
GLN 3880.0156
GLU 3890.0102
PHE 3900.0048
ALA 3910.0067
ALA 3920.0047
LEU 3930.0099
LEU 3940.0124
ALA 3950.0154
GLN 3960.0251
SER 3970.0151
VAL 3980.0129
ASN 3990.0239
GLN 4000.0074
GLY 4010.0220
PHE 4020.0123
GLU 4030.0063
ALA 4040.0049
VAL 4050.0146
TYR 4060.0274
GLN 4070.0355
LEU 4080.0302
THR 4090.0569
ARG 4100.0612
MET 4110.0236
CYS 4120.0248
THR 4130.0163
ILE 4140.0080
ARG 4150.0096
MET 4160.0095
SER 4170.0035
PHE 4180.0050
VAL 4190.0145
LYS 4200.0108
GLY 4210.0110
TRP 4220.0091
GLY 4230.0119
ALA 4240.0072
GLU 4250.0087
TYR 4260.0076
ARG 4270.0170
ARG 4280.0169
GLN 4290.0142
THR 4300.0218
VAL 4310.0163
THR 4320.0219
SER 4330.0221
THR 4340.0136
PRO 4350.0056
CYS 4360.0071
TRP 4370.0140
ILE 4380.0155
GLU 4390.0126
LEU 4400.0086
HIS 4410.0156
LEU 4420.0117
ASN 4430.0176
GLY 4440.0178
PRO 4450.0128
LEU 4460.0162
GLN 4470.0186
TRP 4480.0160
LEU 4490.0075
ASP 4500.0096
LYS 4510.0124
VAL 4520.0188
LEU 4530.0230
THR 4540.0183
GLN 4550.0314
MET 4560.0187
GLY 4570.0416
SER 4580.0417
PRO 4590.0229
SER 4600.0191
VAL 4610.0537
ARG 4620.0480
CYS 4630.0878
SER 4640.0435
SEP 4650.0162
MET 4660.0225
SEP 4670.0178

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.