CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSCRIPTION 01-DEC-01 1KHX  ***

<R2> analysis for 2604171708293065687

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0890
PRO 2650.0719
VAL 2660.0259
THR 2670.0319
TYR 2680.0795
SER 2690.0530
GLU 2700.0379
PRO 2710.0212
ALA 2720.0090
PHE 2730.0124
TRP 2740.0062
CYS 2750.0062
SER 2760.0079
ILE 2770.0027
ALA 2780.0020
TYR 2790.0068
TYR 2800.0064
GLU 2810.0088
LEU 2820.0094
ASN 2830.0100
GLN 2840.0118
ARG 2850.0083
VAL 2860.0082
GLY 2870.0070
GLU 2880.0065
THR 2890.0077
PHE 2900.0082
HIS 2910.0152
ALA 2920.0141
SER 2930.0171
GLN 2940.0167
PRO 2950.0137
SER 2960.0111
LEU 2970.0068
THR 2980.0062
VAL 2990.0048
ASP 3000.0061
GLY 3010.0129
PHE 3020.0103
THR 3030.0213
ASP 3040.0184
LEU 3050.0347
SER 3060.0366
ASN 3070.0168
SER 3080.0090
GLU 3090.0094
ARG 3100.0073
PHE 3110.0039
CYS 3120.0072
LEU 3130.0087
GLY 3140.0149
LEU 3150.0207
LEU 3160.0119
SER 3170.0111
ASN 3180.0114
VAL 3190.0136
ASN 3200.0369
ARG 3210.0107
ASN 3220.0049
ALA 3230.0111
THR 3240.0092
VAL 3250.0047
GLU 3260.0064
MET 3270.0132
THR 3280.0074
ARG 3290.0067
ARG 3300.0122
HIS 3310.0161
ILE 3320.0093
GLY 3330.0325
ARG 3340.0296
GLY 3350.0096
VAL 3360.0101
ARG 3370.0077
LEU 3380.0056
TYR 3390.0080
TYR 3400.0078
ILE 3410.0150
GLY 3420.0157
GLY 3430.0037
GLU 3440.0038
VAL 3450.0029
PHE 3460.0055
ALA 3470.0081
GLU 3480.0074
CYS 3490.0074
LEU 3500.0173
SER 3510.0221
ASP 3520.0408
SER 3530.0200
ALA 3540.0141
ILE 3550.0115
PHE 3560.0134
VAL 3570.0146
GLN 3580.0115
SER 3590.0090
PRO 3600.0043
ASN 3610.0030
CYS 3620.0085
ASN 3630.0070
GLN 3640.0191
ARG 3650.0263
TYR 3660.0383
GLY 3670.0411
TRP 3680.0253
HIS 3690.0138
PRO 3700.0156
ALA 3710.0149
THR 3720.0135
VAL 3730.0144
CYS 3740.0186
LYS 3750.0211
ILE 3760.0161
PRO 3770.0157
PRO 3780.0093
GLY 3790.0092
CYS 3800.0150
ASN 3810.0091
LEU 3820.0173
LYS 3830.0115
ILE 3840.0112
PHE 3850.0060
ASN 3860.0062
ASN 3870.0070
GLN 3880.0085
GLU 3890.0049
PHE 3900.0044
ALA 3910.0268
ALA 3920.0533
LEU 3930.0323
LEU 3940.0125
ALA 3950.0890
GLN 3960.0888
SER 3970.0139
VAL 3980.0307
ASN 3990.0447
GLN 4000.0377
GLY 4010.0435
PHE 4020.0290
GLU 4030.0359
ALA 4040.0266
VAL 4050.0208
TYR 4060.0214
GLN 4070.0179
LEU 4080.0106
THR 4090.0096
ARG 4100.0129
MET 4110.0043
CYS 4120.0058
THR 4130.0081
ILE 4140.0080
ARG 4150.0093
MET 4160.0087
SER 4170.0095
PHE 4180.0058
VAL 4190.0079
LYS 4200.0095
GLY 4210.0090
TRP 4220.0049
GLY 4230.0104
ALA 4240.0218
GLU 4250.0198
TYR 4260.0106
ARG 4270.0222
ARG 4280.0157
GLN 4290.0189
THR 4300.0094
VAL 4310.0093
THR 4320.0123
SER 4330.0122
THR 4340.0125
PRO 4350.0089
CYS 4360.0092
TRP 4370.0076
ILE 4380.0079
GLU 4390.0044
LEU 4400.0041
HIS 4410.0050
LEU 4420.0037
ASN 4430.0049
GLY 4440.0092
PRO 4450.0089
LEU 4460.0077
GLN 4470.0184
TRP 4480.0163
LEU 4490.0136
ASP 4500.0235
LYS 4510.0327
VAL 4520.0221
LEU 4530.0146
THR 4540.0174
GLN 4550.0215
MET 4560.0174
GLY 4570.0305
SER 4580.0234
PRO 4590.0312
SER 4600.0405
VAL 4610.0329
ARG 4620.0114
CYS 4630.0073
SER 4640.0079
SEP 4650.0033
MET 4660.0131
SEP 4670.0167

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.