CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  5HT2AR_elNemo_NMA  ***

<R2> analysis for 2604181804313498919

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0342
ALA 780.0139
LEU 790.0125
LEU 800.0157
THR 810.0098
ALA 820.0099
VAL 830.0112
VAL 840.0043
ILE 850.0040
ILE 860.0071
LEU 870.0032
THR 880.0034
ILE 890.0056
ALA 900.0100
GLY 910.0076
ASN 920.0025
ILE 930.0032
LEU 940.0125
VAL 950.0121
ILE 960.0090
MET 970.0120
ALA 980.0143
VAL 990.0129
SER 1000.0158
LEU 1010.0165
GLU 1020.0036
LYS 1030.0086
LYS 1040.0144
LEU 1050.0197
GLN 1060.0212
ASN 1070.0342
ALA 1080.0168
THR 1090.0091
ASN 1100.0119
TYR 1110.0116
PHE 1120.0061
LEU 1130.0040
MET 1140.0088
SER 1150.0104
LEU 1160.0049
ALA 1170.0063
ILE 1180.0174
ALA 1190.0171
ASP 1200.0114
MET 1210.0166
LEU 1220.0222
LEU 1230.0179
GLY 1240.0155
PHE 1250.0206
LEU 1260.0188
VAL 1270.0160
MET 1280.0096
PRO 1290.0105
VAL 1300.0064
SER 1310.0091
MET 1320.0073
LEU 1330.0086
THR 1340.0088
ILE 1350.0094
LEU 1360.0129
TYR 1370.0123
GLY 1380.0137
TYR 1390.0104
ARG 1400.0088
TRP 1410.0068
PRO 1420.0047
LEU 1430.0113
PRO 1440.0249
SER 1450.0108
LYS 1460.0236
LEU 1470.0235
CYS 1480.0139
ALA 1490.0162
VAL 1500.0116
TRP 1510.0094
ILE 1520.0098
TYR 1530.0116
LEU 1540.0064
ASP 1550.0082
VAL 1560.0059
LEU 1570.0062
PHE 1580.0097
SER 1590.0069
THR 1600.0113
ALA 1610.0124
SER 1620.0076
ILE 1630.0082
MET 1640.0116
HIS 1650.0112
LEU 1660.0083
CYS 1670.0063
ALA 1680.0051
ILE 1690.0064
SER 1700.0054
LEU 1710.0044
ASP 1720.0040
ARG 1730.0056
TYR 1740.0063
VAL 1750.0041
ALA 1760.0077
ILE 1770.0085
GLN 1780.0122
ASN 1790.0078
PRO 1800.0114
ILE 1810.0127
HIS 1820.0080
HIS 1830.0108
SER 1840.0128
ARG 1850.0098
PHE 1860.0106
ASN 1870.0104
SER 1880.0119
ARG 1890.0258
THR 1900.0094
LYS 1910.0212
ALA 1920.0175
PHE 1930.0292
LEU 1940.0256
LYS 1950.0105
ILE 1960.0082
ILE 1970.0126
ALA 1980.0210
VAL 1990.0200
TRP 2000.0210
THR 2010.0230
ILE 2020.0221
SER 2030.0160
VAL 2040.0129
GLY 2050.0286
ILE 2060.0207
SER 2070.0156
MET 2080.0339
PRO 2090.0209
ILE 2100.0092
PRO 2110.0147
VAL 2120.0064
PHE 2130.0066
GLY 2140.0128
LEU 2150.0085
GLN 2160.0330
ASP 2170.0320
ASP 2180.0218
SER 2190.0214
LYS 2200.0163
VAL 2210.0160
PHE 2220.0055
LYS 2230.0243
GLU 2240.0144
GLY 2250.0162
SER 2260.0134
CYS 2270.0127
LEU 2280.0178
LEU 2290.0075
ALA 2300.0080
ASP 2310.0073
ASP 2320.0078
ASN 2330.0103
PHE 2340.0042
VAL 2350.0055
LEU 2360.0071
ILE 2370.0085
GLY 2380.0059
SER 2390.0059
PHE 2400.0127
VAL 2410.0061
SER 2420.0044
PHE 2430.0030
PHE 2440.0058
ILE 2450.0105
PRO 2460.0067
LEU 2470.0064
THR 2480.0104
ILE 2490.0114
MET 2500.0076
VAL 2510.0067
ILE 2520.0071
THR 2530.0078
TYR 2540.0030
PHE 2550.0027
LEU 2560.0027
THR 2570.0034
ILE 2580.0045
LYS 2590.0083
SER 2600.0045
LEU 2610.0053
GLN 2620.0091
ILE 3150.0124
SER 3160.0116
ASN 3170.0071
GLU 3180.0042
GLN 3190.0066
LYS 3200.0037
ALA 3210.0074
CYS 3220.0070
LYS 3230.0105
VAL 3240.0189
LEU 3250.0082
GLY 3260.0081
ILE 3270.0118
VAL 3280.0096
PHE 3290.0052
PHE 3300.0086
LEU 3310.0081
PHE 3320.0051
VAL 3330.0064
VAL 3340.0071
MET 3350.0027
TRP 3360.0030
CYS 3370.0036
PRO 3380.0057
PHE 3390.0064
PHE 3400.0056
ILE 3410.0039
THR 3420.0049
ASN 3430.0034
ILE 3440.0014
MET 3450.0040
ALA 3460.0052
VAL 3470.0008
ILE 3480.0015
CYS 3490.0067
LYS 3500.0119
CYS 3530.0164
ASN 3540.0063
GLU 3550.0082
ASP 3560.0083
VAL 3570.0029
ILE 3580.0059
GLY 3590.0045
ALA 3600.0044
LEU 3610.0034
LEU 3620.0035
ASN 3630.0027
VAL 3640.0040
PHE 3650.0050
VAL 3660.0061
TRP 3670.0043
ILE 3680.0033
GLY 3690.0046
TYR 3700.0070
LEU 3710.0052
SER 3720.0049
SER 3730.0035
ALA 3740.0025
VAL 3750.0057
ASN 3760.0027
PRO 3770.0044
LEU 3780.0057
VAL 3790.0051
TYR 3800.0064
THR 3810.0101
LEU 3820.0028
PHE 3830.0285
ASN 3840.0236
LYS 3850.0135
THR 3860.0120
TYR 3870.0116
ARG 3880.0084
SER 3890.0142
ALA 3900.0164
PHE 3910.0156
SER 3920.0137
ARG 3930.0274

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.