CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2676
PRO 10.0209
GLN 20.0295
ILE 30.0458
THR 40.0241
LEU 50.0670
TRP 60.0611
GLN 70.0617
ARG 80.0768
PRO 90.0845
LEU 100.1439
VAL 110.0995
THR 120.0319
ILE 130.0416
LYS 140.0404
ILE 150.0347
GLY 160.0323
GLY 170.0528
GLN 180.0557
LEU 190.0465
LYS 200.0229
GLU 210.0576
ALA 220.1308
LEU 230.0442
LEU 240.0311
ASP 250.0522
THR 260.0491
GLY 270.0831
ALA 280.0268
ASP 290.0323
ASP 300.0259
THR 310.0325
VAL 320.0401
LEU 330.0443
GLU 340.0569
GLU 350.1213
MET 360.0964
SER 370.0386
LEU 380.1248
PRO 390.0554
GLY 400.2241
ARG 410.0970
TRP 420.2676
LYS 430.1843
PRO 440.2260
LYS 450.2418
MET 460.1627
ILE 470.0803
GLY 480.0603
GLY 490.0799
ILE 500.0951
GLY 510.0381
GLY 520.0570
PHE 530.2029
ILE 540.2036
LYS 550.0198
VAL 560.0879
ARG 570.1546
GLN 580.1547
TYR 590.1172
ASP 600.0887
GLN 610.1281
ILE 620.1295
LEU 630.0618
ILE 640.0536
GLU 650.0325
ILE 660.0313
CYS 670.0835
GLY 680.1618
HIS 690.1031
LYS 700.0437
ALA 710.1152
ILE 720.1922
GLY 730.1385
THR 740.1758
VAL 750.0409
LEU 760.1958
VAL 770.1076
GLY 780.0585
PRO 790.0470
THR 800.0407
PRO 810.0767
VAL 820.0509
ASN 830.0679
ILE 840.0333
ILE 850.0271
GLY 860.0268
ARG 870.0575
ASN 880.1271
LEU 890.1767
LEU 900.1273
THR 910.0668
GLN 920.0740
ILE 930.0410
GLY 940.0510
CYS 950.0090
THR 960.0036
LEU 970.0090
ASN 980.0044
PHE 990.0047

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.