CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

CA strain for 2604200934113787483

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0010
GLN 2ILE 3 0.0025
ILE 3THR 4 0.0037
THR 4LEU 5 -0.0014
LEU 5TRP 6 0.0050
TRP 6GLN 7 0.0036
GLN 7ARG 8 -0.0022
ARG 8PRO 9 0.0315
PRO 9LEU 10 -0.0064
LEU 10VAL 11 -0.0074
VAL 11THR 12 0.0111
THR 12ILE 13 -0.0018
ILE 13LYS 14 -0.0003
LYS 14ILE 15 0.0002
ILE 15GLY 16 -0.0003
GLY 16GLY 17 0.0026
GLY 17GLN 18 -0.0012
GLN 18LEU 19 0.0010
LEU 19LYS 20 0.0004
LYS 20GLU 21 -0.0043
GLU 21ALA 22 0.0018
ALA 22LEU 23 -0.0045
LEU 23LEU 24 -0.0017
LEU 24ASP 25 -0.0029
ASP 25THR 26 0.0017
THR 26GLY 27 0.0013
GLY 27ALA 28 0.0005
ALA 28ASP 29 -0.0009
ASP 29ASP 30 -0.0029
ASP 30THR 31 0.0053
THR 31VAL 32 0.0002
VAL 32LEU 33 0.0044
LEU 33GLU 34 -0.0038
GLU 34GLU 35 0.0015
GLU 35MET 36 0.0029
MET 36SER 37 -0.0012
SER 37LEU 38 0.0053
LEU 38PRO 39 0.0060
PRO 39GLY 40 -0.0131
GLY 40ARG 41 -0.0207
ARG 41TRP 42 -0.0020
TRP 42LYS 43 -0.0259
LYS 43PRO 44 0.0711
PRO 44LYS 45 -0.0638
LYS 45MET 46 -0.0721
MET 46ILE 47 0.0112
ILE 47GLY 48 -0.0329
GLY 48GLY 49 0.0094
GLY 49ILE 50 -0.0013
ILE 50GLY 51 -0.0020
GLY 51GLY 52 -0.0103
GLY 52PHE 53 0.0133
PHE 53ILE 54 -0.0379
ILE 54LYS 55 0.0434
LYS 55VAL 56 -0.0464
VAL 56ARG 57 -0.0491
ARG 57GLN 58 -0.0011
GLN 58TYR 59 -0.0242
TYR 59ASP 60 -0.0087
ASP 60GLN 61 -0.0022
GLN 61ILE 62 -0.0092
ILE 62LEU 63 0.0031
LEU 63ILE 64 0.0012
ILE 64GLU 65 0.0031
GLU 65ILE 66 -0.0010
ILE 66CYS 67 -0.0012
CYS 67GLY 68 0.0008
GLY 68HIS 69 -0.0035
HIS 69LYS 70 -0.0012
LYS 70ALA 71 -0.0013
ALA 71ILE 72 0.0022
ILE 72GLY 73 -0.0020
GLY 73THR 74 -0.0088
THR 74VAL 75 0.0118
VAL 75LEU 76 -0.0444
LEU 76VAL 77 -0.0199
VAL 77GLY 78 -0.0019
GLY 78PRO 79 -0.0055
PRO 79THR 80 0.0011
THR 80PRO 81 0.0001
PRO 81VAL 82 -0.0002
VAL 82ASN 83 0.0010
ASN 83ILE 84 0.0052
ILE 84ILE 85 0.0056
ILE 85GLY 86 -0.0006
GLY 86ARG 87 -0.0008
ARG 87ASN 88 0.0025
ASN 88LEU 89 -0.0016
LEU 89LEU 90 0.0047
LEU 90THR 91 0.0041
THR 91GLN 92 0.0016
GLN 92ILE 93 -0.0042
ILE 93GLY 94 0.0015
GLY 94CYS 95 -0.0021
CYS 95THR 96 -0.0014
THR 96LEU 97 0.0022
LEU 97ASN 98 -0.0005

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.